CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID GmaAffx.66195.1.S1_at

Gene name

Organism Glycine max

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.91 98.6 GmaAffx.66195.1.S1_at AI988572 - - 1e-12 At5g11950 protein homodimerization S.X. H.G.
0.83 92.5 Gma.1195.1.S1_s_at AI442801 - - 5e-25 At3g27890 NQR (NADPH:QUINONE OXIDOREDUCTASE) S.X. H.G.
0.67 86.1 GmaAffx.91496.1.S1_s_at CF807221 - - 4e+0 At3g17300 - S.X. H.G.
0.60 80.7 Gma.6719.4.S1_at BU762353 - - 2e+0 At5g26848 unknown protein S.X. H.G.
0.55 76.3 GmaAffx.2047.1.S1_at CA801759 - - 2e-14 At3g28570 AAA-type ATPase family protein S.X. H.G.
0.40 57.1 GmaAffx.41354.1.S1_at BI786979 - - 6e+0 At5g66550 Maf family protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
15.9 99.6 GSM292170 26-C003.1A.R9A1U, Experimental replicate 1 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
8.8 99.1 GSM293676 15_3039.2C.R9C1U, Experimental replicate 2 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
8.7 99.1 GSM292845 24_1445.1L.R272L, Experimental replicate 1 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
8.5 99.1 GSM294238 87_2337.2H.R240L, Experimental replicate 2 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
8.4 99.1 GSM293546 60_2021.2A.R275L, Experimental replicate 2 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
7.9 99.0 GSM293712 48_2113.2C.R285U, Experimental replicate 2 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
7.6 98.9 GSM293763 9_3039.2C.R9C1L, Experimental replicate 2 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
7.3 98.9 GSM294098 55_2291.2G.R251L, Experimental replicate 2 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
7.3 98.9 GSM292240 49_C033.1B.R9B3L, Experimental replicate 1 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
7.3 98.9 GSM293938 84_3083.2E.R9E2L, Experimental replicate 2 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
1.00 0 801 GmaAffx.66195.1.A1_at BM528431 - - 1e-12 At5g11950 protein homodimerization C.G. S.X.
0.04 3e-1 36 Gma.1443.1.S1_at CD402152 - - 6e-2 At1g10370 ERD9 (EARLY-RESPONSIVE TO DEHYDRATION 9) C.G. S.X.
0.03 1e+0 34 PsAffx.CL1014Contig1_s_at PsAffx.CL1014Contig1 - - 5e+0 At4g32785 - C.G. S.X.
0.02 1e+0 34 PsAffx.C65000027_at PsAffx.C65000027 - - 3e+0 At2g45820 DNA-binding protein, putative C.G. S.X.
0.01 1e+0 34 PsAffx.C41000070_at PsAffx.C41000070 - - 4e+0 At1g43810 unknown protein C.G. S.X.
0.02 1e+0 34 PsAffx.C103000044_at PsAffx.C103000044 - - 8e+0 At5g61240 protein binding C.G. S.X.
0.03 1e+0 34 GmaAffx.5962.1.A1_at BU547811 - - 4e-1 At5g62360 invertase/pectin methylesterase inhibitor family protein C.G. S.X.
0.04 1e+0 34 GmaAffx.49651.1.S1_at BU760995 - - 2e-74 At2g28305 unknown protein C.G. S.X.
0.05 1e+0 34 Gma.617.2.S1_at BM528851 - - 1e-34 At3g53450 unknown protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.34 1e-12 73 Arabidopsis thaliana At5g11950 831068 protein homodimerization Encodes a protein of unknown function. It has been crystallized and shown to be structurally almost identical to the protein encoded by At2G37210. - - - C.G. S.X.
0.07 5e-4 44 Hordeum vulgare Contig14199_at Contig14199 - - 8e-6 At3g53450 unknown protein C.G. S.X.
0.09 1e-4 48 Oryza sativa Os01g0708500 AK061091.1 - Conserved hypothetical protein 730 family protein 1e-8 At4g35190 unknown protein C.G. S.X.
0.36 2e-54 212 Populus trichocarpa PtpAffx.206667.1.S1_at pmrna13230 hypothetical protein - 1e-72 At5g11950 protein homodimerization C.G. S.X.
0.05 4e-3 42 Triticum aestivum TaAffx.52819.1.S1_at CA700588 - - 7e-8 At4g35190 unknown protein C.G. S.X.
0.09 2e-5 48 Vitis vinifera 1622358_s_at CF212311 hypothetical protein LOC100248535 - 7e-2 At2g28305 unknown protein C.G. S.X.
0.08 1e-10 65 Zea mays Zm.17721.1.A1_at CK370164 lysine decarboxylase-like protein - 3e-2 At5g11950 protein homodimerization C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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