CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID GmaAffx.6593.1.S1_at

Gene name

Organism Glycine max

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.91 98.6 GmaAffx.6593.1.S1_at AW432211 - - 2e-34 At5g02500 HSC70-1 (HEAT SHOCK COGNATE PROTEIN 70-1) S.X. H.G.
0.07 10.2 Gma.5024.1.S1_at AW310126 - - 1e-1 At5g41490 F-box family protein S.X. H.G.
0.05 8.0 Gma.4234.1.S1_at BI945133 - - 1e-82 At5g13490 AAC2 (ADP/ATP carrier 2) S.X. H.G.
0.04 7.0 GmaAffx.991.1.S1_at CA819655 - - 2e-7 At5g01340 mitochondrial substrate carrier family protein S.X. H.G.
0.04 7.0 Gma.17519.1.S1_at CD393849 - - 1e-28 At5g64400 - S.X. H.G.
0.01 3.4 Gma.17525.2.S1_x_at BI943980 Heat shock protein 90-1 - 0 At5g56010 HSP81-3 S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
39.7 99.9 GSM209597 susceptible_24hours_rep3 GSE8432 Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhizi
37.6 99.9 GSM293213 93_C039.1O.SLO1L, Experimental replicate 1 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
28.4 99.8 GSM209596 resistant_24hours_rep3 GSE8432 Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhizi
27.5 99.8 GSM170927 Rust Innoculated, biological rep2 GSE7108 Gene expression analysis in soybean with respect to Pahakopsora pachyrhizii at V2 growth stage
25.8 99.8 GSM237069 Soy_shoot apical meristem2 GSE10607 Genome-wide analysis of gene expression in the soybean shoot apical meristem
24.0 99.8 GSM237068 Soy_shoot apical meristem GSE10607 Genome-wide analysis of gene expression in the soybean shoot apical meristem
21.9 99.8 GSM209587 resistant_24hours_rep2 GSE8432 Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhizi
20.3 99.7 GSM170924 V2 Control, biological rep1 GSE7108 Gene expression analysis in soybean with respect to Pahakopsora pachyrhizii at V2 growth stage
18.8 99.7 GSM267287 Axillary meristem from 10-day-old soybean seedlings GSE10607 Genome-wide analysis of gene expression in the soybean shoot apical meristem
14.5 99.6 GSM292274 19_C089.1E.R9E3L, Experimental replicate 1 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.34 4e-42 173 Gma.11115.1.S1_s_at AI856377 - - 7e-68 At5g02500 HSC70-1 (HEAT SHOCK COGNATE PROTEIN 70-1) C.G. S.X.
0.26 9e-37 155 Gma.11179.3.S1_x_at AW423548 - - 2e-171 At5g02500 HSC70-1 (HEAT SHOCK COGNATE PROTEIN 70-1) C.G. S.X.
0.26 9e-37 155 Gma.11179.3.S1_at AW423548 - - 2e-171 At5g02500 HSC70-1 (HEAT SHOCK COGNATE PROTEIN 70-1) C.G. S.X.
0.20 3e-33 143 Gma.11115.2.S1_at BU764731 - - 6e-166 At3g09440 heat shock cognate 70 kDa protein 3 (HSC70-3) (HSP70-3) C.G. S.X.
0.20 3e-33 143 Gma.11115.2.S1_x_at BU764731 - - 6e-166 At3g09440 heat shock cognate 70 kDa protein 3 (HSC70-3) (HSP70-3) C.G. S.X.
0.20 3e-33 143 Gma.11115.2.S1_s_at BU764731 - - 6e-166 At3g09440 heat shock cognate 70 kDa protein 3 (HSC70-3) (HSP70-3) C.G. S.X.
0.25 5e-29 129 Gma.11179.1.S1_s_at AW350100 - - 0 At5g02500 HSC70-1 (HEAT SHOCK COGNATE PROTEIN 70-1) C.G. S.X.
0.25 5e-29 129 Gma.11179.1.S1_at AW350100 - - 0 At5g02500 HSC70-1 (HEAT SHOCK COGNATE PROTEIN 70-1) C.G. S.X.
0.25 5e-29 129 Gma.11179.1.S1_x_at AW350100 - - 0 At5g02500 HSC70-1 (HEAT SHOCK COGNATE PROTEIN 70-1) C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.24 2e-34 147 Arabidopsis thaliana At5g02500 831020 HSC70-1 (HEAT SHOCK COGNATE PROTEIN 70-1) encodes a member of heat shock protein 70 family. - - - C.G. S.X.
0.45 3e-37 155 Hordeum vulgare Contig319_at Contig319 - - 2e-48 At5g02500 HSC70-1 (HEAT SHOCK COGNATE PROTEIN 70-1) C.G. S.X.
0.30 1e-21 105 Oryza sativa Os.38581.1.S1_s_at - - - 0 C.G. S.X.
0.30 1e-11 71 Populus trichocarpa PtpAffx.249.225.S1_a_at CV260633 hypothetical protein - 1e-23 At5g02500 HSC70-1 (HEAT SHOCK COGNATE PROTEIN 70-1) C.G. S.X.
0.41 2e-30 133 Triticum aestivum Ta.15522.1.S1_at CA485306 - - 2e-71 At5g02500 HSC70-1 (HEAT SHOCK COGNATE PROTEIN 70-1) C.G. S.X.
0.32 2e-25 115 Vitis vinifera 1609949_at CF373330 similar to HSC70-1 (heat shock cognate 70 kDa protein 1); ATP binding - 0 At5g02500 HSC70-1 (HEAT SHOCK COGNATE PROTEIN 70-1) C.G. S.X.
0.25 6e-23 107 Zea mays Zm.3081.2.A1_a_at CF626654 heat shock protein1 - 4e-13 At5g02500 HSC70-1 (HEAT SHOCK COGNATE PROTEIN 70-1) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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