Gene omics information

Query gene ID	GmaAffx.65773.1.S1_at
Gene name
Organism	Glycine max

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.91	98.6	GmaAffx.65773.1.S1_at	BI320311	-	-	2e-44	At4g19120	ERD3 (early-responsive to dehydration 3)	S.X.	H.G.	Please select
0.44	63.3	Gma.1479.2.S1_at	AW279120	-	-	6e-21	At4g19120	ERD3 (early-responsive to dehydration 3)	S.X.	H.G.	Please select
0.31	42.2	GmaAffx.84862.1.S1_at	AI965964	-	-	1e-29	At5g61240	protein binding	S.X.	H.G.	Please select
0.12	15.1	GmaAffx.37006.2.S1_at	AI494839	-	-	2e-11	At4g20410	GSNAP (GAMMA-SOLUBLE NSF ATTACHMENT PROTEIN)	S.X.	H.G.	Please select
0.06	9.0	GmaAffx.56409.1.S1_at	BU965321	-	-	1e-16	At1g08750	GPI-anchor transamidase, putative	S.X.	H.G.	Please select
0.01	3.4	Gma.7528.2.S1_at	BM891312	-	-	3e-49	At4g16143	IMPA-2 (IMPORTIN ALPHA ISOFORM 2)	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
5.6	98.3	GSM293390	74_1588.1Q.R230P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
5.4	98.2	GSM293584	16_2089.2B.R181U, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.7	97.8	GSM293595	26_2077.2B.R246U, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.7	97.8	GSM293381	66_C087.1Q.V7Q3L, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.2	97.4	GSM293886	37_3088.2E.V7E3P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.1	97.3	GSM293545	5_3015.2A.V7A3L, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.0	97.2	GSM293613	42_2054.2B.R307P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.0	97.2	GSM293799	42_2160.2D.R076P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.9	97.1	GSM293140	52_1141.1O.R090L, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.8	97.0	GSM293927	74_3075.2E.V7E1L, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.22	4e-83	309	Gma.1479.2.S1_at	AW279120	-	-	6e-21	At4g19120	ERD3 (early-responsive to dehydration 3)	C.G.	S.X.	Please select
0.30	1e-73	278	Gma.1939.1.S1_at	AW100789	-	-	8e-19	At4g19120	ERD3 (early-responsive to dehydration 3)	C.G.	S.X.	Please select
0.03	2e-1	38	Gma.7233.1.S1_at	BQ453257	-	-	2e-39	At4g18030	dehydration-responsive family protein	C.G.	S.X.	Please select
0.04	2e-1	38	Gma.4277.2.S1_a_at	CA785837	-	-	2e-51	At1g26850	dehydration-responsive family protein	C.G.	S.X.	Please select
0.01	8e-1	36	GmaAffx.93073.1.S1_s_at	CF808798	beta-1,3-endoglucanase	-	6e-1	At3g57260	BGL2 (BETA-1,3-GLUCANASE 2)	C.G.	S.X.	Please select
0.02	8e-1	36	GmaAffx.90683.1.S1_at	CF806408	-	-	7e-30	At3g55200	splicing factor, putative	C.G.	S.X.	Please select
0.02	8e-1	36	GmaAffx.72797.1.S1_s_at	AI966445	-	-	9e-1	At5g06300	carboxy-lyase	C.G.	S.X.	Please select
0.02	8e-1	36	GmaAffx.44388.1.S1_at	BE329940	-	-	9e-1	At4g19200	proline-rich family protein	C.G.	S.X.	Please select
0.02	8e-1	36	GmaAffx.37615.1.S1_at	BQ454150	-	-	3e+0	At3g43870	unknown protein	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.35	2e-44	180	Arabidopsis thaliana	At4g19120	827650	ERD3 (early-responsive to dehydration 3)	F:unknown;P:response to water deprivation;C:cellular_component unknown;PBOAF	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.04	2e-2	40	Hordeum vulgare	Contig13791_at	Contig13791	-	-	3e-11	At1g26850	dehydration-responsive family protein	C.G.	S.X.	Please select
0.03	8e-2	40	Oryza sativa	Os10g0569300	AK072459.1	-	Putative methyltransferase DUF248 family protein	3e-10	At1g26850	dehydration-responsive family protein	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.37	6e-48	192	Populus trichocarpa	Ptp.5738.2.S1_s_at	CX658487	hypothetical protein	-	6e-76	At4g19120	ERD3 (early-responsive to dehydration 3)	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.03	3e+0	34	Triticum aestivum	Ta.3322.1.S1_s_at	CK208679	-	-	4e-50	At1g26850	dehydration-responsive family protein	C.G.	S.X.	Please select
0.21	4e-27	121	Vitis vinifera	1619493_at	CB976133	hypothetical protein LOC100251016	-	2e-30	At4g19120	ERD3 (early-responsive to dehydration 3)	C.G.	S.X.	Please select
0.03	3e-1	36	Zea mays	Zm.16771.1.A1_at	AI833437	hypothetical protein LOC100273067	-	6e-21	At2g34300	dehydration-responsive protein-related	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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