Gene omics information

Query gene ID GmaAffx.65408.1.S1_at
Gene name
Organism Glycine max


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.7790.3GmaAffx.65408.1.S1_atAW317848--2e-6At5g09350PI-4KBETA2 (PHOSPHATIDYLINOSITOL 4-OH KINASE BETA2)S.X.H.G.
0.2228.1GmaAffx.20522.1.S1_atBE440570--2e-5At2g27900unknown proteinS.X.H.G.
0.069.0GmaAffx.69266.1.S1_atBU964476--8e-1At5g28919-S.X.H.G.
0.047.0GmaAffx.50852.1.S1_atAI416625--9e-10At5g62600transportin-SR-relatedS.X.H.G.
0.047.0GmaAffx.67768.1.S1_atBU090957--2e-8At1g18830transducin family protein / WD-40 repeat family proteinS.X.H.G.
0.035.8Gma.7239.2.S1_atAI974076--8e-75At1g17720ATB BETAS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
4.697.7GSM29434911_2465.2J.R186L, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.497.6GSM29282582_C184.1K.R9K1P, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.297.4GSM29276830_C198.1K.R9K3P, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.997.1GSM29284726_1475.1L.R288L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.997.1GSM29444211_2497.2K.R218U, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.997.1GSM29448248_2488.2K.R111P, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.897.0GSM2944622_2490.2K.R008P, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.897.0GSM29442580_3168.2J.R9J1P, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.696.7GSM29449761_2517.2K.R140U, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.596.6GSM29439755_2458.2J.R073P, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.015e-136PsAffx.C8000117_atPsAffx.C8000117--1e-2At5g03450zinc finger (C3HC4-type RING finger) family proteinC.G.S.X.
0.035e-136GmaAffx.33632.1.S1_atBU926954--2e-1At4g09960STK (SEEDSTICK)C.G.S.X.
0.012e+034PsAffx.C247000020_atPsAffx.C247000020--3e-2At3g07120zinc finger (C3HC4-type RING finger) family proteinC.G.S.X.
0.012e+034PsAffx.C199000010_atPsAffx.C199000010--5e-1At2g16970MEE15 (maternal effect embryo arrest 15)C.G.S.X.
0.022e+034GmaAffx.76502.1.S1_atBE347827--8e-9At4g04950thioredoxin family proteinC.G.S.X.
0.022e+034GmaAffx.30057.1.S1_atBU549682--1e-1At3g21740APO4 (ACCUMULATION OF PHOTOSYSTEM ONE 4)C.G.S.X.
0.022e+034Gma.843.1.S1_atU71194.1napin-type 2S albumin 1 precursor-4e-1At1g54330ANAC020 (Arabidopsis NAC domain containing protein 20)C.G.S.X.
0.022e+034Gma.351.1.S1_atAW309474--3e-2At2g43110unknown proteinC.G.S.X.
0.032e+034Gma.2602.1.S1_atBU577743--8e-1At4g09965unknown proteinC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.042e-654Arabidopsis thalianaAt5g09350830794PI-4KBETA2 (PHOSPHATIDYLINOSITOL 4-OH KINASE BETA2)Encodes a phosphatidylinositol 4-OH kinase, PI-4Kbeta2. Arabidopsis contains 12 PI-4Ks in three separate families: PI-4Kalphs, PI-4kbeta, and PI-4Kgamma. PI-4Kbeta2 is 83% identical to PI-4kbeta1 encoded by At5g64070. Important for polarized root hair growth as the loss of this gene and its close relative PI-4kbeta1, leads to the formation of abnormal root hairs.---C.G.S.X.
0.033e+032Hordeum vulgareHY06P17u_x_atHY06P17u--8e+0At4g02590UNE12 (unfertilized embryo sac 12)C.G.S.X.
0.017e-136Oryza sativaOs12g0277500AK119217.1-RuBisCO subunit binding-protein alpha subunit,chloroplast precursor (60 kDa chaperonin alpha subunit)(CPN-60 alpha) (Fragment)1e-55At2g28000CPN60A (CHAPERONIN-60ALPHA)C.G.S.X.
0.035e-136Populus trichocarpaPtpAffx.69533.1.A1_atCV254161hypothetical protein-6e-6At1g17960threonyl-tRNA synthetase, putative / threonine--tRNA ligase, putativeC.G.S.X.
0.046e+032Triticum aestivumTaAffx.118759.1.A1_atBJ310692--2e+1At3g55240-C.G.S.X.
0.043e-238Vitis vinifera1613877_atBQ800323hypothetical protein LOC100244974-1e+0At5g37680ATARLA1A (ADP-ribosylation factor-like A1A)C.G.S.X.
0.022e+032Zea maysZm.6385.1.S1_atAI691649--8e-2At5g25600-C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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