Gene omics information

Query gene ID	GmaAffx.65140.1.S1_at
Gene name
Organism	Glycine max

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.71	87.8	GmaAffx.65140.1.S1_at	BI700031	-	-	7e-2	At4g33670	L-galactose dehydrogenase (L-GalDH)	S.X.	H.G.	Please select
0.67	86.1	Gma.17739.1.S1_at	AW310535	-	-	4e-1	At2g04220	unknown protein	S.X.	H.G.	Please select
0.60	80.7	Gma.11341.3.S1_s_at	BM177332	-	-	8e-26	At4g17900	zinc-binding family protein	S.X.	H.G.	Please select
0.50	71.7	Gma.11341.1.S1_at	BG652352	-	-	2e-7	At1g32700	zinc-binding family protein	S.X.	H.G.	Please select
0.50	71.7	GmaAffx.92436.1.S1_s_at	CF806104	-	-	3e-8	At1g72150	PATL1 (PATELLIN 1)	S.X.	H.G.	Please select
0.31	42.2	GmaAffx.91848.1.S1_s_at	CF807208	-	-	1e-58	At3g20770	EIN3 (ETHYLENE-INSENSITIVE3)	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
5.0	98.0	GSM292653	7_C156.1I.V7I2P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.7	97.8	GSM293718	53_2144.2C.R109P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.7	97.8	GSM294038	88_2282.2F.R224P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.6	97.7	GSM292589	19_C160.1I.V7I3P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.6	97.7	GSM292355	24_C103.1F.R9F3L, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.3	97.5	GSM292596	26_C146.1I.V7I1P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.1	97.3	GSM292890	65_C202.1L.R9L1P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.9	97.1	GSM293757	89_3048.2C.V7C2P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.9	97.1	GSM292800	5_1436.1K.R267P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.9	97.1	GSM294025	76_3104.2F.V7F3P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.05	5e-10	65	Gma.5696.1.S1_at	CA803145	-	-	2e-4	At5g15460	MUB2 (MEMBRANE-ANCHORED UBIQUITIN-FOLD PROTEIN 2)	C.G.	S.X.	Please select
0.08	2e-9	63	Gma.5696.2.S1_a_at	BQ629978	-	-	4e-6	At5g15460	MUB2 (MEMBRANE-ANCHORED UBIQUITIN-FOLD PROTEIN 2)	C.G.	S.X.	Please select
0.03	7e-3	42	PsAffx.C94000038_at	PsAffx.C94000038	-	-	3e-2	At4g09460	ATMYB6	C.G.	S.X.	Please select
0.03	4e-1	36	HgAffx.19006.1.S1_at	CB374913	-	-	3e+0	At5g65260	polyadenylate-binding protein family protein / PABP family protein	C.G.	S.X.	Please select
0.03	4e-1	36	GmaAffx.82310.1.S1_at	BG047084	-	-	3e-7	At5g42560	abscisic acid-responsive HVA22 family protein	C.G.	S.X.	Please select
0.03	2e+0	34	HgAffx.24142.1.S1_at	BF013707	-	-	4e+0	At4g37409	unknown protein	C.G.	S.X.	Please select
0.03	2e+0	34	GmaAffx.43516.1.S1_at	BQ453578	-	-	5e-3	At5g16520	unknown protein	C.G.	S.X.	Please select
0.03	2e+0	34	GmaAffx.24953.1.A1_at	BU544899	-	-	5e-3	At2g23140	binding / ubiquitin-protein ligase	C.G.	S.X.	Please select
0.02	2e+0	34	Gma.23.1.S1_at	X16488.1	nodulin-21 (AA 1-201)	-	3e-11	At3g43630	nodulin, putative	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.02	7e-2	38	Arabidopsis thaliana	At4g33670	829509	L-galactose dehydrogenase (L-GalDH)	Encodes a L-galactose dehydrogenase, involved in ascorbate biosynthesis	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.03	2e+0	32	Hordeum vulgare	Contig20680_at	Contig20680	-	-	5e+0	At3g44716	unknown protein	C.G.	S.X.	Please select
0.03	2e+0	34	Oryza sativa	Os05g0231600	AK119476.1	-	Hypothetical protein	2e+0	At4g32340	-	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.03	3e-5	50	Populus trichocarpa	PtpAffx.2144.1.S1_at	CF231300	-	-	1e-1	At3g01050	MUB1 (MEMBRANE-ANCHORED UBIQUITIN-FOLD PROTEIN 1 PRECURSOR)	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.03	1e+0	34	Triticum aestivum	TaAffx.24723.1.S1_at	CA713480	-	-	8e-1	At2g01340	unknown protein	C.G.	S.X.	Please select
0.03	9e-2	36	Vitis vinifera	1613357_at	BQ799969	-	-	4e+0	At3g15860	unknown protein	C.G.	S.X.	Please select
0.03	8e+0	30	Zea mays	Zm.5691.1.A1_at	AW065747	-	-	7e-4	At3g13850	LBD22 (LOB DOMAIN-CONTAINING PROTEIN 22)	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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