Gene omics information

Query gene ID GmaAffx.64309.2.S1_at
Gene name
Organism Glycine max


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.6282.1GmaAffx.64309.2.S1_atAW309050--4e-43At5g38110ASF1B (ANTI- SILENCING FUNCTION 1B)S.X.H.G.
0.8191.7GmaAffx.92270.1.S1_atCF807322--4e-53At5g09590MTHSC70-2 (MITOCHONDRIAL HSP70 2)S.X.H.G.
0.7489.2GmaAffx.82634.1.S1_atBM178738--3e-72At5g16930AAA-type ATPase family proteinS.X.H.G.
0.7288.1GmaAffx.92270.1.S1_s_atCF807322--4e-53At5g09590MTHSC70-2 (MITOCHONDRIAL HSP70 2)S.X.H.G.
0.7187.8Gma.6056.1.S1_atBQ453230--2e-4At1g2310010 kDa chaperonin, putativeS.X.H.G.
0.4665.5GmaAffx.230.1.S1_atCD416961--2e-2At3g4459060S acidic ribosomal protein P2 (RPP2D)S.X.H.G.
0.4665.5Gma.6395.1.S1_atBU547039--1e-65At4g02930elongation factor Tu, putative / EF-Tu, putativeS.X.H.G.
0.4360.6Gma.6820.1.S1_atAI416867--1e-13At1g03860ATPHB2 (PROHIBITIN 2)S.X.H.G.
0.4360.6Gma.3183.1.S1_a_atBE822841--2e-14At3g20050ATTCP-1S.X.H.G.
0.3853.3Gma.11147.1.S1_atCA937458--2e+0At3g46170short-chain dehydrogenase/reductase (SDR) family proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
35.299.9GSM258496Vegetative soybean shoot apical meristemGSE10251Gene expression profiling implicates novel hormonal regulation of the floral initiation process in soybeans
27.899.8GSM258499Soybean shoot apical meristem, 4 short-day treatmentGSE10251Gene expression profiling implicates novel hormonal regulation of the floral initiation process in soybeans
27.899.8GSM267287Axillary meristem from 10-day-old soybean seedlings GSE10607Genome-wide analysis of gene expression in the soybean shoot apical meristem
24.799.8GSM258504Soybean shoot apical meristem, 4 short-day replicate BGSE10251Gene expression profiling implicates novel hormonal regulation of the floral initiation process in soybeans
22.999.8GSM258502Vegetative shoot apical meristem, replicate BGSE10251Gene expression profiling implicates novel hormonal regulation of the floral initiation process in soybeans
21.599.8GSM237068Soy_shoot apical meristemGSE10607Genome-wide analysis of gene expression in the soybean shoot apical meristem
19.899.7GSM258501Soybean shoot apical meristem, 1 short-day treatment replicate BGSE10251Gene expression profiling implicates novel hormonal regulation of the floral initiation process in soybeans
19.499.7GSM267288Axillary meristem from 10-day-old soybean seedlings repliacte 2GSE10607Genome-wide analysis of gene expression in the soybean shoot apical meristem
18.499.7GSM258497Soybean Shoot Apical Meristem, 1 short-day treatmentGSE10251Gene expression profiling implicates novel hormonal regulation of the floral initiation process in soybeans
16.199.6GSM258498Soybean shoot apical meristem, 2 short-day treatmentGSE10251Gene expression profiling implicates novel hormonal regulation of the floral initiation process in soybeans
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.045e-652Gma.14653.2.S1_a_atBQ080095--9e-33At1g63180UGE3 (UDP-D-glucose/UDP-D-galactose 4-epimerase 3)C.G.S.X.
0.055e-342GmaAffx.57775.1.S1_s_atBQ081638--1e-46At5g41700UBC8 (UBIQUITIN CONJUGATING ENZYME 8)C.G.S.X.
0.035e-342Gma.11119.5.S1_atBI315933--2e-99At5g53300UBC10 (ubiquitin-conjugating enzyme 10)C.G.S.X.
0.035e-342Gma.11119.5.S1_x_atBI315933--2e-99At5g53300UBC10 (ubiquitin-conjugating enzyme 10)C.G.S.X.
0.042e-240PsAffx.CL1893Contig1_atPsAffx.CL1893Contig1--1e-1At5g42980ATTRX3 (THIOREDOXIN 3)C.G.S.X.
0.028e-238PsAffx.C34000104_atPsAffx.C34000104--3e+0At2g34310unknown proteinC.G.S.X.
0.048e-238GmaAffx.66003.1.S1_atAI461128--3e-1At2g36295unknown proteinC.G.S.X.
0.048e-238GmaAffx.49469.1.S1_s_atBG047279--2e-1At5g07040zinc finger (C3HC4-type RING finger) family proteinC.G.S.X.
0.058e-238GmaAffx.32347.1.A1_atBI970426--3e+0At3g24520AT-HSFC1C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.494e-43174Arabidopsis thalianaAt5g38110833791ASF1B (ANTI- SILENCING FUNCTION 1B)This gene is predicted to encode a silencing group A protein. Plant lines expressing RNAi constructs directed against SGA1 have reduced levels of agrobacterium-mediated root transformation.---C.G.S.X.
0.432e-37155Hordeum vulgareContig10104_atContig10104--1e-16At5g38110ASF1B (ANTI- SILENCING FUNCTION 1B)C.G.S.X.
0.381e-32141Oryza sativaOsAffx.15141.3.S1_s_at---0C.G.S.X.
0.301e-65250Populus trichocarpaPtpAffx.43868.1.S1_atCV282588silencing group A protein-4e-45At5g38110ASF1B (ANTI- SILENCING FUNCTION 1B)C.G.S.X.
0.429e-41167Triticum aestivumTa.6897.1.S1_atBJ310110--6e-19At5g38110ASF1B (ANTI- SILENCING FUNCTION 1B)C.G.S.X.
0.044e-340Vitis vinifera1621192_atCF516648hypothetical protein LOC100248705-4e+0At2g27920SCPL51 (SERINE CARBOXYPEPTIDASE-LIKE 51)C.G.S.X.
0.311e-22105Zea maysZm.13729.1.S1_atAY106251.1anti-silencing protein 1-1e-20At5g38110ASF1B (ANTI- SILENCING FUNCTION 1B)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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