Gene omics information

Query gene ID GmaAffx.64090.1.S1_at
Gene name
Organism Glycine max


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.6786.1GmaAffx.64090.1.S1_atAW203536--2e-20At4g29060emb2726 (embryo defective 2726)S.X.H.G.
0.8693.0Gma.16479.2.S1_atBE191411--1e-2At5g27390-S.X.H.G.
0.7388.9Gma.8261.1.A1_s_atAW348445--1e-1At5g14910heavy-metal-associated domain-containing proteinS.X.H.G.
0.6786.1Gma.10122.1.A1_atCD405211--3e-8At5g1432030S ribosomal protein S13, chloroplast (CS13)S.X.H.G.
0.6382.9Gma.1355.1.S1_atBU545782--1e-4At3g54210ribosomal protein L17 family proteinS.X.H.G.
0.6181.8Gma.10595.1.S1_atCD414051--2e-40At1g64510ribosomal protein S6 family proteinS.X.H.G.
0.4158.1Gma.2305.1.S1_atCD402601--2e-19At2g33800ribosomal protein S5 family proteinS.X.H.G.
Click here to hide the above table.


Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
129.8100.0GSM238061Soybean-S03W4-5-RMAGSE9374Exploration of microarrays as tools to assess substantial equivalence of genetically modified soybeans
102.7100.0GSM238041Soybean-Bayfield-4-RMAGSE9374Exploration of microarrays as tools to assess substantial equivalence of genetically modified soybeans
96.9100.0GSM238052Soybean-PS46R-1-RMAGSE9374Exploration of microarrays as tools to assess substantial equivalence of genetically modified soybeans
94.2100.0GSM238043Soybean-Bayfield-5-RMAGSE9374Exploration of microarrays as tools to assess substantial equivalence of genetically modified soybeans
90.2100.0GSM245938Leaf_LCO treated_Rep 3_48 h After TreatmentGSE9730Effect of foliar spray of lipo-chitooligosaccharide (Nod factor) on soybean leaf gene expression.
86.1100.0GSM238034Soybean-2601R-6-RMAGSE9374Exploration of microarrays as tools to assess substantial equivalence of genetically modified soybeans
83.9100.0GSM238030Soybean-2601R-2-RMAGSE9374Exploration of microarrays as tools to assess substantial equivalence of genetically modified soybeans
83.4100.0GSM238060Soybean-S03W4-4-RMAGSE9374Exploration of microarrays as tools to assess substantial equivalence of genetically modified soybeans
82.6100.0GSM238039Soybean-Bayfield-3-RMAGSE9374Exploration of microarrays as tools to assess substantial equivalence of genetically modified soybeans
81.4100.0GSM238031Soybean-2601R-3-RMAGSE9374Exploration of microarrays as tools to assess substantial equivalence of genetically modified soybeans
Click here to hide the above table.


Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.335e-124444Gma.1666.1.S1_atBG508327--8e-37At4g29060emb2726 (embryo defective 2726)C.G.S.X.
0.014e-136PsAffx.C26000015_atPsAffx.C26000015--2e+0At1g35850APUM17 (Arabidopsis Pumilio 17)C.G.S.X.
0.022e+034PsAffx.C164000015_atPsAffx.C164000015--2e-1At1g02710glycine-rich proteinC.G.S.X.
0.002e+034PsAffx.C13000093_atPsAffx.C13000093--8e-2At4g38410dehydrin, putativeC.G.S.X.
0.032e+034GmaAffx.19850.1.A1_atBU551163--6e+0At5g03810carboxylesterase/ hydrolase, acting on ester bonds / lipaseC.G.S.X.
0.032e+034GmaAffx.16095.1.S1_atAI959874--1e-3At4g17430unknown proteinC.G.S.X.
0.032e+034Gma.16628.1.S1_s_atBU547568--1e-22At1g26300BSD domain-containing proteinC.G.S.X.
0.032e+034Gma.16628.1.S1_atBU547568--1e-22At1g26300BSD domain-containing proteinC.G.S.X.
0.006e+032PsAffx.C76000068_atPsAffx.C76000068--9e-1At4g24290-C.G.S.X.
Click here to hide the above table.



Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.162e-2099Arabidopsis thalianaAt4g29060829027emb2726 (embryo defective 2726)F:RNA binding, translation elongation factor activity;P:embryonic development ending in seed dormancy, translational elongation, response to cadmium ion;C:chloroplast stroma, chloroplast, chloroplast envelope;BOMFPAV---C.G.S.X.
0.041e-136Hordeum vulgarerbaal27g13_x_atrbaal27g13--7e+0At5g41380-C.G.S.X.
0.094e-1169Oryza sativaOs12g0541500AK067367.1-Elongation factor Ts (EF-Ts)1e-10At4g29060emb2726 (embryo defective 2726)C.G.S.X.
0.439e-64244Populus trichocarpaPtpAffx.128497.1.S1_atCV277499hypothetical protein-4e-64At4g29060emb2726 (embryo defective 2726)C.G.S.X.
0.113e-1065Triticum aestivumTa.454.1.S1_atBQ171739--7e-10At4g29060emb2726 (embryo defective 2726)C.G.S.X.
0.177e-24109Vitis vinifera1610546_atCB976033similar to Os12g0541500-1e-35At4g29060emb2726 (embryo defective 2726)C.G.S.X.
0.023e-238Zea maysZm.12312.1.S1_atCD441645hypothetical protein LOC100216941-1e-21At1g60940SNRK2.10 (SNF1-RELATED PROTEIN KINASE 2.10)C.G.S.X.
Click here to hide the above table.


Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
Click here to hide the above table.


Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
Click here to hide the above table.



Back to the CoP portal site

Back to the KAGIANA project homepage