Gene omics information

Query gene ID	GmaAffx.63395.2.S1_s_at
Gene name
Organism	Glycine max

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.77	90.3	GmaAffx.63395.2.S1_s_at	BF597240	-	-	2e-1	At1g49310	unknown protein	S.X.	H.G.	Please select
0.55	76.3	Gma.15969.1.S1_at	BM178705	-	-	2e-17	At5g63860	UVR8 (UVB-RESISTANCE 8)	S.X.	H.G.	Please select
0.53	74.2	GmaAffx.5957.1.S1_s_at	BU547329	-	-	3e+0	At3g19900	unknown protein	S.X.	H.G.	Please select
0.40	57.1	Gma.5783.1.S1_s_at	BE822378	-	-	8e-24	At5g55260	PPX2 (PROTEIN PHOSPHATASE X 2)	S.X.	H.G.	Please select
0.38	53.3	Gma.7090.2.S1_at	BM520113	-	-	6e-8	At5g13560	unknown protein	S.X.	H.G.	Please select
0.26	33.9	Gma.3754.2.S1_at	AW156404	-	-	4e-16	At3g18430	calcium-binding EF hand family protein	S.X.	H.G.	Please select
0.14	17.5	GmaAffx.45366.1.S1_at	BG507323	-	-	3e+0	At5g22180	unknown protein	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
5.2	98.1	GSM294244	92_2340.2H.R202P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.9	98.0	GSM293419	10_C108.1R.R9R3P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.9	97.1	GSM292752	16_1442.1K.R270P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.9	97.1	GSM293561	74_2028.2A.R196P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.9	97.1	GSM294132	86_3112.2G.R9G1P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.7	96.8	GSM293440	2_1598.1R.R015P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.6	96.7	GSM293911	5_2236.2E.R249P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.5	96.6	GSM294651	24_2594.2M.R227P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.5	96.6	GSM294206	58_2338.2H.R240P_new, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.4	96.4	GSM294114	6_3114.2G.SLG1P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.53	9e-131	466	GmaAffx.63395.1.S1_at	AW348073	-	-	3e-2	At4g02075	PIT1 (pitchoun 1)	C.G.	S.X.	Please select
0.01	7e-2	38	PsAffx.C364000005_at	PsAffx.C364000005	-	-	2e+0	At1g52480		C.G.	S.X.	Please select
0.03	7e-2	38	GmaAffx.77292.1.S1_at	CA934970	-	-	2e-3	At3g22070	proline-rich family protein	C.G.	S.X.	Please select
0.04	3e-1	36	HgAffx.8126.1.S1_at	CB380375	-	-	1e+1	At5g13240	transcription regulator	C.G.	S.X.	Please select
0.03	3e-1	36	GmaAffx.86323.1.S1_at	BM887582	-	-	6e-6	At3g29075	glycine-rich protein	C.G.	S.X.	Please select
0.04	3e-1	36	GmaAffx.76272.1.S1_at	BE330990	-	-	3e+0	At5g16430	-	C.G.	S.X.	Please select
0.03	3e-1	36	Gma.12401.1.S1_at	AW349517	-	-	6e-1	At1g78410	VQ motif-containing protein	C.G.	S.X.	Please select
0.03	1e+0	34	PsAffx.psZS004xC09f_at	PsAffx.psZS004xC09f	-	-	1e+0	At4g32800	AP2 domain-containing transcription factor TINY, putative	C.G.	S.X.	Please select
0.01	1e+0	34	PsAffx.C358000001_at	PsAffx.C358000001	-	-	7e-1	At4g11300	unknown protein	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.07	2e-1	36	Arabidopsis thaliana	At1g49310	841354	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.04	2e+0	32	Hordeum vulgare	HT12B02u_at	HT12B02u	-	-	1e+0	At5g43680	unknown protein	C.G.	S.X.	Please select
0.03	4e-1	36	Oryza sativa	OsAffx.32349.1.A1_at	-	-	-	0			C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.23	4e-22	105	Populus trichocarpa	PtpAffx.2522.4.S1_at	CV268467	-	-	7e-7	At5g58575	-	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.05	5e-2	38	Triticum aestivum	TaAffx.51916.1.S1_at	CA716507	-	-	3e+0	At4g26010	peroxidase, putative	C.G.	S.X.	Please select
0.04	2e-1	34	Vitis vinifera	1613687_at	CD713993	-	-	4e+0	At4g01590	unknown protein	C.G.	S.X.	Please select
0.04	3e-1	34	Zea mays	Zm.10168.1.A1_at	CA404699	-	-	1e+0	At5g16430	-	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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