Gene omics information

Query gene ID GmaAffx.62228.1.S1_at
Gene name
Organism Glycine max


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.9198.6GmaAffx.62228.1.S1_atAW568014--8e-1Atmg00910-S.X.H.G.
0.1114.2GmaAffx.14602.1.S1_atBM731566--2e-1At3g45851unknown proteinS.X.H.G.
0.024.5Gma.10380.1.S1_atCD399901--3e-16At4g26570ATCBL3 (ARABIDOPSIS THALIANA CALCINEURIN B-LIKE 3)S.X.H.G.
0.013.4Gma.437.1.S1_s_atCD401627Profilin, PRO2-1e-10At2g19760PRF1 (PROFILIN 1)S.X.H.G.
0.013.4GmaAffx.99.2.A1_s_atBE330213Translationally controlled tumor-like protein-3e-1At3g26670-S.X.H.G.
0.013.4Gma.570.1.A1_atCD408884--4e-20At3g43240ARID/BRIGHT DNA-binding domain-containing proteinS.X.H.G.
Click here to hide the above table.


Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
48.599.9GSM29364168_2065.2B.R129U, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
39.599.9GSM29238660_1231.1F.R142U, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
19.399.7GSM29423180_3134.2H.V7H2P, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
18.599.7GSM29301722_C024.1N.V7N1P, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
17.599.7GSM2946683_3218.2M.V7M1P, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
17.299.7GSM29222216_C029.1B.R9B2U, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
14.799.6GSM29400659_3094.2F.V7F1P, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
12.799.5GSM308556Mature Soybean (Glycine max) pollen grains replicate 1GSE12286Genomic Expression Profiling of Mature Soybean (Glycine max) Pollen
11.699.4GSM29397127_3100.2F.V7F2P, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
11.599.4GSM29310016_1120.1O.R076P, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
Click here to hide the above table.


Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.033e-136Gma.5002.1.S1_atBU547027--4e-5At3g10650-C.G.S.X.
0.033e-136Gma.4311.1.S1_atCD410181--7e-3At4g04830methionine sulfoxide reductase domain-containing protein / SeIR domain-containing proteinC.G.S.X.
0.011e+034PsAffx.C336000003_atPsAffx.C336000003--2e-1At5g22310unknown proteinC.G.S.X.
0.021e+034PsAffx.C139000014_atPsAffx.C139000014--5e-1At5g23250succinyl-CoA ligase (GDP-forming) alpha-chain, mitochondrial, putative / succinyl-CoA synthetase, alpha chain, putative / SCS-alpha, putativeC.G.S.X.
0.041e+034GmaAffx.66332.1.S1_atAW100302--2e-1At3g09085unknown proteinC.G.S.X.
0.035e+032PsAffx.CL667Contig2_atPsAffx.CL667Contig2--5e-3At5g13220JAZ10 (JASMONATE-ZIM-DOMAIN PROTEIN 10)C.G.S.X.
0.035e+032PsAffx.C91000024_atPsAffx.C91000024--2e+0At3g20640ethylene-responsive protein -relatedC.G.S.X.
0.015e+032PsAffx.C3000163_atPsAffx.C3000163--3e+0At5g40440ATMKK3 (ARABIDOPSIS THALIANA MITOGEN-ACTIVATED PROTEIN KINASE KINASE 3)C.G.S.X.
0.025e+032PsAffx.C228000018_atPsAffx.C228000018--2e+0At1g49150unknown proteinC.G.S.X.
Click here to hide the above table.



Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.048e-134Arabidopsis thalianaAtmg00910--hypothetical protein---C.G.S.X.
0.036e+030Hordeum vulgareContig20346_atContig20346--8e-2At3g60590unknown proteinC.G.S.X.
0.034e-136Oryza sativaOs.18004.1.A1_s_at---0C.G.S.X.
0.075e+032Populus trichocarpaPtpAffx.76547.1.A1_atCV226050--1e+1At4g01460basic helix-loop-helix (bHLH) family proteinC.G.S.X.
0.049e-134Triticum aestivumTaAffx.26399.1.S1_atCA689267--1e+1At5g59110subtilisin-like serine protease-relatedC.G.S.X.
0.032e-134Vitis vinifera1619567_atBQ799671hypothetical protein LOC100245596-4e+0At5g09330anac082 (Arabidopsis NAC domain containing protein 82)C.G.S.X.
0.036e+030Zea maysZm.6580.2.A1_a_atAI619113succinyl-CoA ligase beta-chain /// succinyl-CoA ligase beta-chain-4e-22At2g20420succinyl-CoA ligase (GDP-forming) beta-chain, mitochondrial, putative / succinyl-CoA synthetase, beta chain, putative / SCS-beta, putativeC.G.S.X.
Click here to hide the above table.


Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
Click here to hide the above table.


Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
Click here to hide the above table.



Back to the CoP portal site

Back to the KAGIANA project homepage