Gene omics information

Query gene ID	GmaAffx.61892.1.S1_at
Gene name
Organism	Glycine max

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.91	98.6	GmaAffx.61892.1.S1_at	BF716032	-	-	2e-40	At5g35730	EXS family protein / ERD1/XPR1/SYG1 family protein	S.X.	H.G.	Please select
0.31	42.2	Gma.2211.2.S1_a_at	BM520077	-	-	1e-9	At3g53520	UXS1 (UDP-GLUCURONIC ACID DECARBOXYLASE 1)	S.X.	H.G.	Please select
0.10	13.0	Gma.2211.2.S1_x_at	BM520077	-	-	1e-9	At3g53520	UXS1 (UDP-GLUCURONIC ACID DECARBOXYLASE 1)	S.X.	H.G.	Please select
0.07	10.2	GmaAffx.62496.1.S1_at	AW309009	-	-	1e-3	At2g30460	-	S.X.	H.G.	Please select
0.03	5.8	GmaAffx.84688.1.S1_at	AI460889	-	-	5e-24	At4g14240	-	S.X.	H.G.	Please select
0.03	5.8	Gma.739.1.S1_at	BG882670	-	-	6e-15	At5g27490	integral membrane Yip1 family protein	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
6.4	98.6	GSM147938	Laser capture microdissected (LCM) suspensor at the globular stage, biological replicate 3	GSE6414	Expression data from soybean seed compartments with embryos at the globular stage
5.1	98.1	GSM292923	95_1465.1L.R283L, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.5	97.7	GSM244827	21_SLO.M3W4.CEL, Experimental replicate 4	GSE9687	Expression patterns in time and space during P.sojae infection of soybean cultivars differing in quantitative resistance
4.4	97.6	GSM244907	3_CON.M5W3.CEL, Experimental replicate 3	GSE9687	Expression patterns in time and space during P.sojae infection of soybean cultivars differing in quantitative resistance
4.3	97.5	GSM292838	18_C211.1L.SLL3L, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.1	97.3	GSM293952	9_3078.2E.SLE1P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.9	97.1	GSM244807	17_CON.M2W3.CEL, Experimental replicate 3	GSE9687	Expression patterns in time and space during P.sojae infection of soybean cultivars differing in quantitative resistance
3.9	97.1	GSM294050	99_2270.2F.R040P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.7	96.8	GSM294046	95_2267.2F.R154U, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.6	96.7	GSM292845	24_1445.1L.R272L, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.09	7e-10	65	Gma.1899.2.A1_at	CD411173	-	-	2e-9	At5g35730	EXS family protein / ERD1/XPR1/SYG1 family protein	C.G.	S.X.	Please select
0.20	4e-8	59	Gma.17414.1.S1_at	BG651268	-	-	8e-17	At5g35730	EXS family protein / ERD1/XPR1/SYG1 family protein	C.G.	S.X.	Please select
0.02	2e-1	38	Gma.6462.2.S1_a_at	BE555263	-	-	3e+0	At4g08560	APUM15 (Arabidopsis Pumilio 15)	C.G.	S.X.	Please select
0.03	6e-1	36	GmaAffx.92886.1.S1_s_at	CF808611	-	-	3e-41	At5g09900	EMB2107 (EMBRYO DEFECTIVE 2107)	C.G.	S.X.	Please select
0.03	6e-1	36	GmaAffx.92886.1.S1_at	CF808611	-	-	3e-41	At5g09900	EMB2107 (EMBRYO DEFECTIVE 2107)	C.G.	S.X.	Please select
0.02	6e-1	36	GmaAffx.17383.1.S1_at	AW703644	-	-	9e-2	At2g41140	CRK1 (CDPK-RELATED KINASE 1)	C.G.	S.X.	Please select
0.01	6e-1	36	Gma.15861.1.S1_at	BM523547	-	-	1e-46	At5g09900	EMB2107 (EMBRYO DEFECTIVE 2107)	C.G.	S.X.	Please select
0.03	6e-1	36	Gma.13870.1.A1_at	CD408566	-	-	2e-1	At4g38900	bZIP protein	C.G.	S.X.	Please select
0.00	2e+0	34	PsAffx.C13000093_at	PsAffx.C13000093	-	-	8e-2	At4g38410	dehydrin, putative	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.30	2e-40	167	Arabidopsis thaliana	At5g35730	833549	EXS family protein / ERD1/XPR1/SYG1 family protein	F:molecular_function unknown;P:biological_process unknown;C:integral to membrane;MFPO	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.13	3e-19	95	Hordeum vulgare	Contig14948_at	Contig14948	-	-	1e-4	At5g35730	EXS family protein / ERD1/XPR1/SYG1 family protein	C.G.	S.X.	Please select
0.13	7e-20	99	Oryza sativa	Os12g0595000	AK065252.1	-	EXS, C-terminal domain containing protein	3e-13	At5g35730	EXS family protein / ERD1/XPR1/SYG1 family protein	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.26	2e-25	117	Populus trichocarpa	PtpAffx.222228.1.S1_s_at	pmrna39503	predicted small molecule transporter	-	9e-22	At5g35730	EXS family protein / ERD1/XPR1/SYG1 family protein	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.15	2e-28	127	Triticum aestivum	Ta.10706.1.S1_x_at	CK153112	-	-	5e-11	At5g35730	EXS family protein / ERD1/XPR1/SYG1 family protein	C.G.	S.X.	Please select
0.03	5e-1	34	Vitis vinifera	1607000_at	CD799845	-	-	9e-1	At3g48640	unknown protein	C.G.	S.X.	Please select
0.02	1e+1	30	Zea mays	ZmAffx.1106.1.A1_at	AW216267	-	-	3e-3	At1g60550	ECHID (ENOYL-COA HYDRATASE/ISOMERASE D)	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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