Gene omics information

Query gene ID GmaAffx.60645.1.S1_at
Gene name
Organism Glycine max


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.8693.0GmaAffx.60645.1.S1_atBI701603--2e-4At3g53300CYP71B31S.X.H.G.
0.5778.8Gma.11528.2.S1_x_atBG316001--3e-1Atmg00750-S.X.H.G.
0.5374.2GmaAffx.60645.2.S1_s_atBQ742710--8e-1At5g26810pectinesterase family proteinS.X.H.G.
0.5172.3Gma.5173.1.S1_atAW707000--2e+0At5g53200TRY (TRIPTYCHON)S.X.H.G.
0.4968.3Gma.5173.2.S1_atBM270690--3e+0At5g17140cysteine proteinase-relatedS.X.H.G.
0.4158.1GmaAffx.60645.2.S1_atBQ742710--8e-1At5g26810pectinesterase family proteinS.X.H.G.
0.4057.1GmaAffx.81346.2.S1_atBU083613--8e-14At5g47900unknown proteinS.X.H.G.
0.3751.7GmaAffx.53833.1.S1_atAW185395--6e-14At5g35220EGY1 (ETHYLENE-DEPENDENT GRAVITROPISM-DEFICIENT AND YELLOW-GREEN 1)S.X.H.G.
0.3548.6GmaAffx.73345.1.S1_s_atBQ454088--2e-1At4g13320unknown proteinS.X.H.G.
0.3243.7GmaAffx.72621.1.S1_atAW201860--6e-8At3g02720DJ-1 family protein / protease-relatedS.X.H.G.
Click here to hide the above table.


Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
189.9100.0GSM245936Leaf_LCO treated_Rep 1_48 h After TreatmentGSE9730Effect of foliar spray of lipo-chitooligosaccharide (Nod factor) on soybean leaf gene expression.
131.3100.0GSM29334836_1593.1Q.R302U, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
122.5100.0GSM245937Leaf_LCO treated_Rep 2_48 h After TreatmentGSE9730Effect of foliar spray of lipo-chitooligosaccharide (Nod factor) on soybean leaf gene expression.
111.0100.0GSM245933Leaf_Water Control_Rep 1_48 h After TreatmentGSE9730Effect of foliar spray of lipo-chitooligosaccharide (Nod factor) on soybean leaf gene expression.
77.1100.0GSM245938Leaf_LCO treated_Rep 3_48 h After TreatmentGSE9730Effect of foliar spray of lipo-chitooligosaccharide (Nod factor) on soybean leaf gene expression.
73.7100.0GSM209590susceptible_48hours_rep2GSE8432Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhizi
68.2100.0GSM245934Leaf_Water Control_Rep 2_48 h After TreatmentGSE9730Effect of foliar spray of lipo-chitooligosaccharide (Nod factor) on soybean leaf gene expression.
48.799.9GSM29455628_2573.2L.R302U, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
39.099.9GSM29340083_1593.1Q.R302L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
20.999.7GSM29462389_2573.2L.R302L, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
Click here to hide the above table.


Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.454e-99361GmaAffx.60645.2.S1_atBQ742710--8e-1At5g26810pectinesterase family proteinC.G.S.X.
0.454e-99361GmaAffx.60645.2.S1_s_atBQ742710--8e-1At5g26810pectinesterase family proteinC.G.S.X.
0.404e-34145GmaAffx.83206.1.S1_atBE610184--2e-2At3g26210CYP71B23C.G.S.X.
0.274e-25115GmaAffx.93309.1.S1_s_atCF808307--1e-5At4g22710CYP706A2C.G.S.X.
0.063e-446GmaAffx.58553.1.S1_atBE609824--1e-3At5g25140CYP71B13C.G.S.X.
0.041e+034PsAffx.psHB025xO07f_s_atPsAffx.psHB025xO07f--1e+0At3g62350-C.G.S.X.
0.001e+034PsAffx.C180000016_atPsAffx.C180000016--3e-1At5g44510TAO1 (TARGET OF AVRB OPERATION1)C.G.S.X.
0.031e+034GmaAffx.93489.1.A1_atCF805737--3e+0At4g31940CYP82C4C.G.S.X.
0.031e+034GmaAffx.90135.1.S1_s_atCF805860--1e-3At2g30490C4H (CINNAMATE-4-HYDROXYLASE)C.G.S.X.
Click here to hide the above table.



Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.032e-446Arabidopsis thalianaAt3g53300824497CYP71B31putative cytochrome P450---C.G.S.X.
0.032e+032Hordeum vulgareContig23163_atContig23163--4e+0At1g27240paired amphipathic helix repeat-containing proteinC.G.S.X.
0.022e+034Oryza sativaOs08g0139200AK070351.1-1,4-benzoquinone reductase-like (Putative lightharvesting pigment protein)4e-29At4g27270quinone reductase family proteinC.G.S.X.
0.077e-238Populus trichocarpaPtp.6116.1.S1_atBU811435cytochrome P450 /// cytochrome P450-2e-3At4g31500CYP83B1 (CYTOCHROME P450 MONOOXYGENASE 83B1)C.G.S.X.
0.043e+032Triticum aestivumTaAffx.79513.3.S1_atCA717161--2e-1At5g42520ATBPC6C.G.S.X.
0.054e-340Vitis vinifera1613920_atCB979957hypothetical protein LOC100260935-2e+0At1g07830ribosomal protein L29 family proteinC.G.S.X.
0.041e+032Zea maysZmAffx.848.1.A1_atAI770631--8e-1At1g22720wall-associated kinase, putativeC.G.S.X.
Click here to hide the above table.


Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
Click here to hide the above table.


Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
Click here to hide the above table.



Back to the CoP portal site

Back to the KAGIANA project homepage