Gene omics information

Query gene ID GmaAffx.60216.1.S1_at
Gene name
Organism Glycine max


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.9198.6GmaAffx.60216.1.S1_atBM527040--9e-4At4g16740ATTPS03S.X.H.G.
0.3548.6GmaAffx.88908.1.A1_x_atCK605775--2e-28At5g59880ADF3 (ACTIN DEPOLYMERIZING FACTOR 3)S.X.H.G.
0.2939.0Gma.16125.1.S1_atBQ298270--6e-46At3g61110ARS27A (ARABIDOPSIS RIBOSOMAL PROTEIN S27)S.X.H.G.
0.2939.0GmaAffx.91487.1.S1_x_atCF807212elongation factor 1A SMV resistance-related protein-2e-114At5g60390elongation factor 1-alpha / EF-1-alphaS.X.H.G.
0.2735.7GmaAffx.1898.1.S1_atBU578959--1e+0At1g1593040S ribosomal protein S12 (RPS12A)S.X.H.G.
0.0912.0Gma.6150.2.S1_x_atCD416056--1e-23At5g59880ADF3 (ACTIN DEPOLYMERIZING FACTOR 3)S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
36.999.9GSM29364168_2065.2B.R129U, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
25.699.8GSM191084Soybean_Cotyledon_EPD2GSE7881Expression data from soybean seed compartments with embryos at the cotyledon stage
22.499.8GSM29238660_1231.1F.R142U, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
22.399.8GSM182035Laser capture microdissected (LCM) endosperm at the heart stage, biological replicate 1GSE7511Expression data from soybean seed compartments with embryos at the heart stage
16.799.7GSM29216318-1009.1A.R006L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
15.199.6GSM29292395_1465.1L.R283L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
12.599.5GSM29322413_1155.1P.R097U, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
12.199.5GSM147950Laser capture microdissected (LCM) hilum at the globular stage, biological replicate 3GSE6414Expression data from soybean seed compartments with embryos at the globular stage
12.099.4GSM29224356_C025.1B.SLB2U, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
11.899.4GSM182043Laser capture microdissected (LCM) inner integument at the heart stage, biological replicate 1GSE7511Expression data from soybean seed compartments with embryos at the heart stage
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.031e+034GmaAffx.53256.1.S1_atBU545086--2e+0At5g50361unknown proteinC.G.S.X.
0.031e+034Gma.3914.1.S1_atBI702206--2e+0At1g27300unknown proteinC.G.S.X.
0.025e+032PsAffx.C53000042_atPsAffx.C53000042--8e-1At4g36830GNS1/SUR4 membrane family proteinC.G.S.X.
0.045e+032GmaAffx.78366.2.S1_atBM891171--8e-1At5g03230unknown proteinC.G.S.X.
0.035e+032GmaAffx.76266.1.A1_atBU548890--5e+0At1g18940nodulin family proteinC.G.S.X.
0.035e+032GmaAffx.76266.1.S1_atBG882548--5e+0At1g18940nodulin family proteinC.G.S.X.
0.035e+032GmaAffx.74302.1.S1_atAW203781--1e-81At3g17205UPL6 (UBIQUITIN PROTEIN LIGASE 6)C.G.S.X.
0.025e+032GmaAffx.71575.1.S1_atAW185456--1e-4At5g07850transferase family proteinC.G.S.X.
0.035e+032GmaAffx.34228.1.A1_atBE658103--4e-10At3g49870ATARLA1C (ADP-ribosylation factor-like A1C)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.039e-444Arabidopsis thalianaAt4g16740827377ATTPS03Monoterpene synthase, catalyzes the formation of the acyclic monoterpene (E)-beta-ocimene in response to wounding or treatment with jasmonic acid.---C.G.S.X.
0.064e-134Hordeum vulgareContig24917_atContig24917--8e-9At2g3337060S ribosomal protein L23 (RPL23B)C.G.S.X.
0.056e+032Oryza sativaOsAffx.13379.1.S1_at---0C.G.S.X.
0.041e+034Populus trichocarpaPtpAffx.29090.1.A1_atDN489213hypothetical protein-3e+0At5g55200co-chaperone grpE protein, putativeC.G.S.X.
0.056e-238Triticum aestivumTaAffx.59233.1.S1_atCA605600--3e+0At2g18410unknown proteinC.G.S.X.
0.044e+030Vitis vinifera1619546_atCD719868--1e+0At3g50260CEJ1 (COOPERATIVELY REGULATED BY ETHYLENE AND JASMONATE 1)C.G.S.X.
0.031e+032Zea maysZm.828.1.A1_atAI734461hypothetical protein LOC100277560-5e+0At3g21371unknown proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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