Gene omics information

Query gene ID GmaAffx.5978.1.S1_at
Gene name
Organism Glycine max


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.9599.4GmaAffx.5978.1.S1_atBU548662--8e-6At1g06160ORA59 (OCTADECANOID-RESPONSIVE ARABIDOPSIS AP2/ERF 59)S.X.H.G.
0.1215.1GmaAffx.56917.1.S1_atAI441130--2e-11At1g14370APK2A (PROTEIN KINASE 2A)S.X.H.G.
0.1013.0GmaAffx.9400.1.S1_atBI893703--8e-1At3g17480F-box family proteinS.X.H.G.
0.0710.2GmaAffx.14871.1.S1_atBG510693--9e-1At3g01760lysine and histidine specific transporter, putativeS.X.H.G.
0.058.0GmaAffx.19116.1.S1_atBI968419receptor-like protein kinase 2-like-2e-29At1g53420serine/threonine protein kinase-relatedS.X.H.G.
0.058.0GmaAffx.65829.1.A1_atCD392418--5e-5At5g47220ERF2 (ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 2)S.X.H.G.
0.047.0Gma.6555.1.S1_atBM954521--5e+0At2g27250CLV3 (CLAVATA3)S.X.H.G.
0.047.0GmaAffx.16044.1.S1_atAI460793--4e-2At4g25710kelch repeat-containing F-box family proteinS.X.H.G.
0.035.8GmaAffx.81992.1.S1_atBI471624--2e-11At4g23180CRK10 (CYSTEINE-RICH RLK10)S.X.H.G.
0.024.5GmaAffx.1715.1.S1_atBQ611844--1e+0At5g38060unknown proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
26.199.8GSM29351936_3008.2A.SLA2P, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
17.699.7GSM29349716_2018.2A.R245P, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
17.299.7GSM29251026_1317.1H.R200L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
17.199.7GSM29404796_3095.2F.R9F1L, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
16.799.7GSM29422777_3136.2H.SLH2P, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
16.399.6GSM2449349_SLO.I2W4.CEL, Experimental replicate 4GSE9687Expression patterns in time and space during P.sojae infection of soybean cultivars differing in quantitative resistance
12.099.4GSM2940075_3095.2F.R9F1U, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
11.399.4GSM209578resistant_24hours_rep1 *failed QC*GSE8432Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhizi
11.299.4GSM29252943_1317.1H.R200U, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
10.699.3GSM29244142_C117.1G.SLG2U, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.177e-1065GmaAffx.51274.1.S1_atBQ080756--1e-14At2g31230ATERF15 (Ethylene-responsive element binding factor 15)C.G.S.X.
0.054e-550GmaAffx.83655.1.S1_atAW185128--2e-9At5g61590AP2 domain-containing transcription factor family proteinC.G.S.X.
0.047e-446GmaAffx.69792.1.S1_s_atBU550596--3e-8At5g64750ABR1 (ABA REPRESSOR1)C.G.S.X.
0.047e-446Gma.16700.1.S1_atCD402881--7e-6At3g23230ethylene-responsive factor, putativeC.G.S.X.
0.024e-240Gma.3332.1.S1_atBQ298780--3e-5At1g68725AGP19 (ARABINOGALACTAN-PROTEIN 19)C.G.S.X.
0.012e-138PsAffx.C136000027_atPsAffx.C136000027--7e-2At1g76010nucleic acid bindingC.G.S.X.
0.042e-138GmaAffx.92059.1.S1_atCF807784--2e-6At2g33710AP2 domain-containing transcription factor family proteinC.G.S.X.
0.022e-138Gma.9244.1.S1_atCA802738--2e-22At1g30300unknown proteinC.G.S.X.
0.017e-136PsAffx.C6000080_atPsAffx.C6000080--5e+0At3g11500small nuclear ribonucleoprotein G, putative / snRNP-G, putative / Sm protein G, putativeC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.158e-652Arabidopsis thalianaAt1g06160837125ORA59 (OCTADECANOID-RESPONSIVE ARABIDOPSIS AP2/ERF 59)encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5.---C.G.S.X.
0.039e-134Hordeum vulgareS0001000056O23F1_atS0001000056O23F1--3e+0At5g14910heavy-metal-associated domain-containing proteinC.G.S.X.
0.036e-240Oryza sativaOs01g0584100AK109126.1-Hypothetical protein1e-1At1g70895CLE17 (CLAVATA3/ESR-RELATED 17)C.G.S.X.
0.124e-859Populus trichocarpaPtpAffx.208714.1.S1_atpmrna17280AP2/ERF domain-containing transcription factor-6e-9At3g23240ERF1 (ETHYLENE RESPONSE FACTOR 1)C.G.S.X.
0.032e+034Triticum aestivumTaAffx.78850.1.S1_atCA725945--4e+0At3g07590small nuclear ribonucleoprotein D1, putative / snRNP core protein D1, putative / Sm protein D1, putativeC.G.S.X.
0.034e-238Vitis vinifera1618309_atCB968982AP1-like protein-6e+0At2g02050NADH-ubiquinone oxidoreductase B18 subunit, putativeC.G.S.X.
0.031e-240Zea maysZm.17963.1.A1_atCK826782--3e+0At5g65840-C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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