Gene omics information

Query gene ID	GmaAffx.58230.1.S1_s_at
Gene name
Organism	Glycine max

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.84	92.6	GmaAffx.58230.1.S1_s_at	BE583535	-	-	3e+0	At4g11870	unknown protein	S.X.	H.G.	Please select
0.71	87.8	PsAffx.CL1325Contig1_at	PsAffx.CL1325Contig1	-	-	4e+0	At1g17190	ATGSTU26 (ARABIDOPSIS THALIANA GLUTATHIONE S-TRANSFERASE TAU 26)	S.X.	H.G.	Please select
0.69	86.8	PsAffx.CL626Contig1_at	PsAffx.CL626Contig1	-	-	3e+0	At1g74430	MYB95 (myb domain protein 95)	S.X.	H.G.	Please select
0.69	86.8	PsAffx.C93000028_at	PsAffx.C93000028	-	-	1e+0	At1g28327	-	S.X.	H.G.	Please select
0.65	83.8	PsAffx.CL1676Contig1_at	PsAffx.CL1676Contig1	-	-	7e+0	At4g11870	unknown protein	S.X.	H.G.	Please select
0.59	79.5	PsAffx.CL516Contig1_at	PsAffx.CL516Contig1	-	-	2e+0	At3g04630	WDL1	S.X.	H.G.	Please select
0.58	78.8	PsAffx.CL1582Contig1_s_at	PsAffx.CL1582Contig1	-	-	2e+0	At5g62100	ATBAG2 (ARABIDOPSIS THALIANA BCL-2-ASSOCIATED ATHANOGENE 2)	S.X.	H.G.	Please select
0.58	78.8	PsAffx.CL49Contig1_at	PsAffx.CL49Contig1	-	-	9e+0	At5g24314	PTAC7	S.X.	H.G.	Please select
0.56	78.2	PsAffx.CL1858Contig1_at	PsAffx.CL1858Contig1	-	-	1e-4	At5g11770	NADH-ubiquinone oxidoreductase 20 kDa subunit, mitochondrial	S.X.	H.G.	Please select
0.55	76.3	GmaAffx.76369.1.S1_s_at	BE583545	-	-	1e+1	At4g00810	60S acidic ribosomal protein P1 (RPP1B)	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
131.5	100.0	GSM294303	54_3153.2I.R9I2L, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
85.9	100.0	GSM171703	4_W.E.I.5, Experimental replicate W	GSE7124	Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistance
81.6	100.0	GSM293756	88_2113.2C.R285L, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
67.1	100.0	GSM294092	4_3111.2G.R9G1L, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
60.1	99.9	GSM292384	59_C093.1F.R9F1L, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
58.2	99.9	GSM293226	15_C065.1P.R9P2L, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
57.0	99.9	GSM294151	16_3139.2H.R9H3L, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
50.8	99.9	GSM292405	9_C101.1F.R9F2L, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
45.7	99.9	GSM292360	2_C093.1F.R9F1U, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
44.4	99.9	GSM293248	35_1155.1P.R097L, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.52	1e-175	615	PsAffx.CL1676Contig1_at	PsAffx.CL1676Contig1	-	-	7e+0	At4g11870	unknown protein	C.G.	S.X.	Please select
0.13	2e-20	99	PsAffx.C106000046_s_at	PsAffx.C106000046	-	-	2e-1	At2g35700	ERF38 (ERF FAMILY PROTEIN 38)	C.G.	S.X.	Please select
0.09	7e-14	77	PsAffx.CL457Contig1_at	PsAffx.CL457Contig1	-	-	3e+0	At2g29125	RTFL2 (ROTUNDIFOLIA LIKE 2)	C.G.	S.X.	Please select
0.04	1e-6	54	PsAffx.CL291Contig1_at	PsAffx.CL291Contig1	-	-	1e+1	At4g02380	SAG21 (SENESCENCE-ASSOCIATED GENE 21)	C.G.	S.X.	Please select
0.02	4e-6	52	PsAffx.C60000031_at	PsAffx.C60000031	-	-	1e-1	At3g20310	ERF7 (ETHYLINE RESPONSE FACTOR 7)	C.G.	S.X.	Please select
0.03	4e-6	52	PsAffx.C34000062_at	PsAffx.C34000062	-	-	8e-1	At1g73790	unknown protein	C.G.	S.X.	Please select
0.04	2e-4	46	PsAffx.C182000023_at	PsAffx.C182000023	-	-	3e-3	At5g23950	C2 domain-containing protein	C.G.	S.X.	Please select
0.04	2e-4	46	PsAffx.C106000043_at	PsAffx.C106000043	-	-	5e-2	At1g30475	-	C.G.	S.X.	Please select
0.01	4e-3	42	PsAffx.C222000001_at	PsAffx.C222000001	-	-	1e+0	At4g14870	P-P-bond-hydrolysis-driven protein transmembrane transporter	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.06	3e+0	32	Arabidopsis thaliana	At4g11870	826794	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;OBFMAP	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.04	1e+0	32	Hordeum vulgare	HVSMEa0003H08r2_at	HVSMEa0003H08r2	-	-	4e+0	At1g21460	nodulin MtN3 family protein	C.G.	S.X.	Please select
0.04	1e+0	34	Oryza sativa	Os02g0512400	AK073461.1	-	Glutaredoxin domain containing protein	6e-16	At3g02000	ROXY1	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.04	4e+0	32	Populus trichocarpa	PtpAffx.222760.1.S1_x_at	pmrna40394	hypothetical protein	-	2e-1	At1g07140	SIRANBP	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.05	2e-1	36	Triticum aestivum	TaAffx.78545.5.S1_x_at	CA698524	WRKY39 transcription factor	-	1e+0	At2g28760	NAD-dependent epimerase/dehydratase family protein	C.G.	S.X.	Please select
0.06	8e-4	42	Vitis vinifera	1607615_at	CB349949	hypothetical protein LOC100263240	-	3e-4	At3g54990	SMZ (SCHLAFMUTZE)	C.G.	S.X.	Please select
0.04	1e+0	32	Zea mays	Zm.9753.1.A1_at	BM337948	Grx_C15 - glutaredoxin subgroup III	-	2e+1	At2g43261	unknown protein	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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