Gene omics information

Query gene ID GmaAffx.58190.1.S1_at
Gene name
Organism Glycine max


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.9399.1GmaAffx.58190.1.S1_atBE610236--4e-7At5g12080MSL10 (MECHANOSENSITIVE CHANNEL OF SMALL CONDUCTANCE-LIKE 10)S.X.H.G.
0.5474.8Gma.3727.1.S1_atCD406941transcription factor bZIP98-2e-16At3g12250TGA6 (TGACG MOTIF-BINDING FACTOR 6)S.X.H.G.
0.4463.3Gma.2314.1.S1_atAW310385--1e-33At4g24740AFC2 (ARABIDOPSIS FUS3-COMPLEMENTING GENE 2)S.X.H.G.
0.4057.1GmaAffx.59378.1.S1_atBI425133--1e+0At1g80100AHP6 (ARABIDOPSIS HISTIDINE PHOSPHOTRANSFER PROTEIN 6)S.X.H.G.
0.3954.5Gma.2314.4.S1_a_atBE330278--4e-76At4g24740AFC2 (ARABIDOPSIS FUS3-COMPLEMENTING GENE 2)S.X.H.G.
0.3954.5GmaAffx.46711.1.S1_atBI497564--4e+0At4g25560AtMYB18 (myb domain protein 18)S.X.H.G.
0.3853.3Gma.7467.1.A1_atAI959991WRKY9 protein-3e-23At2g03340WRKY3S.X.H.G.
0.3142.2Gma.17436.1.S1_atCD397773--4e-23At4g36450ATMPK14 (Mitogen-activated protein kinase 14)S.X.H.G.
0.3142.2GmaAffx.10095.2.S1_atBF070472--6e-12At1g59650CW14S.X.H.G.
0.2939.0Gma.7035.1.S1_atAW348267--8e-11At5g06260nucleolar protein-relatedS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
7.698.9GSM147952Laser capture microdissected (LCM) inner integument at the globular stage, biological replicate 2GSE6414Expression data from soybean seed compartments with embryos at the globular stage
5.998.5GSM29284221_1443.1L.R271L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.897.9GSM29297350_1491.1M.R296U, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.596.6GSM29319476_1133.1O.R084L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.496.4GSM29237246_C097.1F.SLF2U, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.396.2GSM29361342_2054.2B.R307P, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.296.0GSM29384887_2171.2D.R243U, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.296.0GSM29303135_1055.1N.R032U, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.296.0GSM29399044_2245.2F.R272U, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.296.0GSM182044Laser capture microdissected (LCM) inner integument at the heart stage, biological replicate 2GSE7511Expression data from soybean seed compartments with embryos at the heart stage
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.231e-60234Gma.7562.1.A1_atBQ298534--1e+0At1g06100fatty acid desaturase family proteinC.G.S.X.
0.035e-136HgAffx.2985.1.S1_atCK349712--3e+0At2g37810CHP-rich zinc finger protein, putativeC.G.S.X.
0.035e-136GmaAffx.83421.2.S1_atBF425371--4e-15At1g50200ALATS (ALANYL-TRNA SYNTHETASE)C.G.S.X.
0.022e+034PsAffx.CL62Contig1_atPsAffx.CL62Contig1--3e+0At3g44235unknown proteinC.G.S.X.
0.012e+034PsAffx.C18000020_atPsAffx.C18000020--3e+0At1g23040hydroxyproline-rich glycoprotein family proteinC.G.S.X.
0.022e+034Gma.1411.1.S1_atCD417799--8e-13At4g29080PAP2 (PHYTOCHROME-ASSOCIATED PROTEIN 2)C.G.S.X.
0.022e+034Gma.1411.1.S1_a_atCD417799--8e-13At4g29080PAP2 (PHYTOCHROME-ASSOCIATED PROTEIN 2)C.G.S.X.
0.027e+032PsAffx.psMA008xB11f_atPsAffx.psMA008xB11f--6e+0At5g18920unknown proteinC.G.S.X.
0.017e+032PsAffx.C50000075_atPsAffx.C50000075--2e-1At5g13910LEP (LEAFY PETIOLE)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.094e-756Arabidopsis thalianaAt5g12080831081MSL10 (MECHANOSENSITIVE CHANNEL OF SMALL CONDUCTANCE-LIKE 10)F:mechanically-gated ion channel activity;P:detection of mechanical stimulus;C:plasma membrane, membrane;BOFAP---C.G.S.X.
0.063e-342Hordeum vulgareContig9205_atContig9205--5e-4At1g53470MSL4 (MECHANOSENSITIVE CHANNEL OF SMALL CONDUCTANCE-LIKE 4)C.G.S.X.
0.053e-344Oryza sativaOs02g0668000AK101871.1-MscS Mechanosensitive ion channel family protein1e-7At2g17010mechanosensitive ion channel domain-containing protein / MS ion channel domain-containing proteinC.G.S.X.
0.195e-38159Populus trichocarpaPtpAffx.206645.1.S1_atpmrna13196hypothetical protein-4e-9At5g12080MSL10 (MECHANOSENSITIVE CHANNEL OF SMALL CONDUCTANCE-LIKE 10)C.G.S.X.
0.061e+034Triticum aestivumTa.6800.1.S1_atBJ311176--4e-5At1g78610MSL6 (MECHANOSENSITIVE CHANNEL OF SMALL CONDUCTANCE-LIKE 6)C.G.S.X.
0.107e-1579Vitis vinifera1618463_atCF207350hypothetical protein LOC100257841-7e-3At1g53470MSL4 (MECHANOSENSITIVE CHANNEL OF SMALL CONDUCTANCE-LIKE 4)C.G.S.X.
0.039e+030Zea maysZmAffx.172.1.A1_atAI668238--3e+0Atmg00240-C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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