Gene omics information

Query gene ID GmaAffx.57527.1.A1_at
Gene name
Organism Glycine max


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.7187.8GmaAffx.57527.1.A1_atBU549562--3e-1At3g22570protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinS.X.H.G.
0.1721.2GmaAffx.10633.1.S1_atBU760967--2e-1At1g47317-S.X.H.G.
0.024.5Gma.4820.1.S1_atBI969236--3e-10At2g44280-S.X.H.G.
0.013.4GmaAffx.88044.1.A1_atBU549128--3e-1At4g38060unknown proteinS.X.H.G.
0.001.4Gma.2590.5.S1_atCA935591--4e-60At1g63800UBC5 (ubiquitin-conjugating enzyme 5)S.X.H.G.
0.001.4Gma.7754.1.S1_atCD409221--9e-10At4g39850PXA1 (PEROXISOMAL ABC TRANSPORTER 1)S.X.H.G.
Click here to hide the above table.


Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
31.999.9GSM209591mock_0hours_rep3GSE8432Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhizi
31.899.9GSM209590susceptible_48hours_rep2GSE8432Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhizi
24.599.8GSM209589resistant_48hours_rep2GSE8432Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhizi
19.599.7GSM209587resistant_24hours_rep2GSE8432Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhizi
16.299.6GSM2946683_3218.2M.V7M1P, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
12.299.5GSM209597susceptible_24hours_rep3GSE8432Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhizi
10.799.4GSM209599susceptible_48hours_rep3GSE8432Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhizi
10.399.3GSM29301520_1089.1N.R055L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
9.499.2GSM209582mock_0hours_rep2GSE8432Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhizi
8.999.2GSM29244849_C110.1G.V7G1P, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
Click here to hide the above table.


Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.692e-111402Gma.13527.1.A1_atCD399838--3e+0At4g21192-C.G.S.X.
0.371e-56220GmaAffx.45671.1.S1_atBI424047--1e+0At4g12390PME1 (PECTIN METHYLESTERASE INHIBITOR 1)C.G.S.X.
0.182e-36153GmaAffx.77200.1.S1_atBG405912--1e+0At5g37070unknown proteinC.G.S.X.
0.032e+034Gma.14117.1.A1_atCD415757--1e+0At5g45960GDSL-motif lipase/hydrolase family proteinC.G.S.X.
0.032e+034Gma.13177.2.S1_a_atAW507568--5e-27At3g48930EMB1080 (embryo defective 1080)C.G.S.X.
0.026e+032PsAffx.CL77Contig1_s_atPsAffx.CL77Contig1--2e-1At2g31410unknown proteinC.G.S.X.
0.016e+032PsAffx.C11000062_atPsAffx.C11000062--1e+0At2g39800P5CS1 (DELTA1-PYRROLINE-5-CARBOXYLATE SYNTHASE 1)C.G.S.X.
0.026e+032HgAffx.22854.1.S1_atBG310696--6e+0At3g05746unknown proteinC.G.S.X.
0.046e+032GmaAffx.9199.1.S1_atBI426418--3e+0At5g09960unknown proteinC.G.S.X.
Click here to hide the above table.



Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.043e-136Arabidopsis thalianaAt3g22570821829protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinF:lipid binding;P:lipid transport;C:endomembrane system;P---C.G.S.X.
0.042e+032Hordeum vulgareHS07G21u_s_atHS07G21u--2e+1At5g02470DPAC.G.S.X.
0.049e+032Oryza sativaOsAffx.7705.1.S1_at---0C.G.S.X.
0.067e-961Populus trichocarpaPtpAffx.2169.1.S1_s_atCV251175hypothetical protein-4e-1At5g23120HCF136C.G.S.X.
0.041e+034Triticum aestivumTa.16085.1.S1_atCA597973--4e-1At2g16600ROC3C.G.S.X.
0.061e+032Vitis vinifera1617947_atCF211415--5e+0At5g3985040S ribosomal protein S9 (RPS9C)C.G.S.X.
0.032e+032Zea maysZm.5076.1.A1_atAI600726hypothetical protein LOC100193426-6e+0At5g03170FLA11C.G.S.X.
Click here to hide the above table.


Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
Click here to hide the above table.


Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
Click here to hide the above table.



Back to the CoP portal site

Back to the KAGIANA project homepage