Gene omics information

Query gene ID GmaAffx.56938.1.S1_at
Gene name
Organism Glycine max


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.9599.4GmaAffx.56938.1.S1_atBM178073--3e-6At4g10480nascent polypeptide associated complex alpha chain protein, putative / alpha-NAC, putativeS.X.H.G.
0.6786.1GmaAffx.91649.1.S1_s_atCF807374ribosomal protein L2-2e-85At2g18020EMB2296 (embryo defective 2296)S.X.H.G.
0.5778.8Gma.11262.1.S1_atCD415864--2e-27At4g2623060S ribosomal protein L31 (RPL31B)S.X.H.G.
0.5576.3Gma.11262.1.S1_x_atCD415864--2e-27At4g2623060S ribosomal protein L31 (RPL31B)S.X.H.G.
0.5273.1Gma.5892.1.S1_atCA852600--3e-15At5g64200ATSC35S.X.H.G.
0.5273.1Gma.15124.1.S1_atBU548348--1e-41At1g27310NTF2A (NUCLEAR TRANSPORT FACTOR 2A)S.X.H.G.
0.5172.3Gma.16803.1.A1_atCD404227--9e-39At2g40290eukaryotic translation initiation factor 2 subunit 1, putative / eIF-2A, putative / eIF-2-alpha, putativeS.X.H.G.
0.4867.7GmaAffx.92405.1.S1_s_atCF808130G beta-like protein-2e-49At1g18080ATARCAS.X.H.G.
0.4867.7GmaAffx.46538.1.S1_s_atBM732780ribosomal protein S13-2e-10At4g00100ATRPS13A (ARABIDOPSIS THALIANA RIBOSOMAL PROTEIN S13A)S.X.H.G.
0.4766.6Gma.11295.2.S1_x_atBE209656--2e-17At5g5667040S ribosomal protein S30 (RPS30C)S.X.H.G.
Click here to hide the above table.


Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
8.699.1GSM29292395_1465.1L.R283L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
7.999.0GSM267287Axillary meristem from 10-day-old soybean seedlings GSE10607Genome-wide analysis of gene expression in the soybean shoot apical meristem
7.799.0GSM258496Vegetative soybean shoot apical meristemGSE10251Gene expression profiling implicates novel hormonal regulation of the floral initiation process in soybeans
7.298.9GSM258499Soybean shoot apical meristem, 4 short-day treatmentGSE10251Gene expression profiling implicates novel hormonal regulation of the floral initiation process in soybeans
6.198.5GSM258502Vegetative shoot apical meristem, replicate BGSE10251Gene expression profiling implicates novel hormonal regulation of the floral initiation process in soybeans
5.798.4GSM258504Soybean shoot apical meristem, 4 short-day replicate BGSE10251Gene expression profiling implicates novel hormonal regulation of the floral initiation process in soybeans
5.598.3GSM237068Soy_shoot apical meristemGSE10607Genome-wide analysis of gene expression in the soybean shoot apical meristem
5.198.1GSM309531storage protein suppression expt, RNAi biol rep2, tech rep2GSE12314Storage Protein Suppression in Transgenic Soybean Cotyledons
5.198.1GSM258497Soybean Shoot Apical Meristem, 1 short-day treatmentGSE10251Gene expression profiling implicates novel hormonal regulation of the floral initiation process in soybeans
4.998.0GSM309530storage protein suppression expt, RNAi biol rep2, tech rep1GSE12314Storage Protein Suppression in Transgenic Soybean Cotyledons
Click here to hide the above table.


Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.695e-80297GmaAffx.91307.1.S1_s_atCF807032--8e-23At4g10480nascent polypeptide associated complex alpha chain protein, putative / alpha-NAC, putativeC.G.S.X.
0.706e-64244GmaAffx.75176.1.S1_atBF070694--2e-20At3g49470NACA2 (NASCENT POLYPEPTIDE-ASSOCIATED COMPLEX SUBUNIT ALPHA-LIKE PROTEIN 2)C.G.S.X.
0.326e-61234Gma.11021.1.S1_atCD401781--3e-33At3g49470NACA2 (NASCENT POLYPEPTIDE-ASSOCIATED COMPLEX SUBUNIT ALPHA-LIKE PROTEIN 2)C.G.S.X.
0.504e-50198Gma.11021.2.S1_x_atCA782994--1e-18At3g49470NACA2 (NASCENT POLYPEPTIDE-ASSOCIATED COMPLEX SUBUNIT ALPHA-LIKE PROTEIN 2)C.G.S.X.
0.504e-50198Gma.11021.2.S1_atCA782994--1e-18At3g49470NACA2 (NASCENT POLYPEPTIDE-ASSOCIATED COMPLEX SUBUNIT ALPHA-LIKE PROTEIN 2)C.G.S.X.
0.063e-446PsAffx.CL1598Contig1_atPsAffx.CL1598Contig1--2e-2At1g04778unknown proteinC.G.S.X.
0.023e-446PsAffx.C9000050_atPsAffx.C9000050--9e-1At2g30766unknown proteinC.G.S.X.
0.053e-446GmaAffx.91206.1.S1_x_atCF806931--2e-24At3g12390nascent polypeptide associated complex alpha chain protein, putative / alpha-NAC, putativeC.G.S.X.
0.011e-344PsAffx.C69000008_atPsAffx.C69000008--1e-2At5g66540-C.G.S.X.
Click here to hide the above table.



Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.163e-652Arabidopsis thalianaAt4g10480826640nascent polypeptide associated complex alpha chain protein, putative / alpha-NAC, putativeF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MFOPABV---C.G.S.X.
0.111e-136Hordeum vulgareContig11109_atContig11109--1e-10At4g10480nascent polypeptide associated complex alpha chain protein, putative / alpha-NAC, putativeC.G.S.X.
0.064e-446Oryza sativaOs03g0121700AK059982.1--2e-6At3g49470NACA2 (NASCENT POLYPEPTIDE-ASSOCIATED COMPLEX SUBUNIT ALPHA-LIKE PROTEIN 2)C.G.S.X.
0.221e-1583Populus trichocarpaPtp.744.1.A1_atCV257858hypothetical protein-2e-34At3g49470NACA2 (NASCENT POLYPEPTIDE-ASSOCIATED COMPLEX SUBUNIT ALPHA-LIKE PROTEIN 2)C.G.S.X.
0.104e-652Triticum aestivumTa.3425.1.S1_a_atBG904860--3e-30At3g12390nascent polypeptide associated complex alpha chain protein, putative / alpha-NAC, putativeC.G.S.X.
0.216e-30129Vitis vinifera1616748_atCF215206hypothetical protein LOC100246856-2e-37At3g49470NACA2 (NASCENT POLYPEPTIDE-ASSOCIATED COMPLEX SUBUNIT ALPHA-LIKE PROTEIN 2)C.G.S.X.
0.094e-444Zea maysZm.2135.1.S1_atCD436684hypothetical protein LOC100217069-4e-26At5g13850NACA3 (NASCENT POLYPEPTIDE-ASSOCIATED COMPLEX SUBUNIT ALPHA-LIKE PROTEIN 3)C.G.S.X.
Click here to hide the above table.


Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
Click here to hide the above table.


Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
Click here to hide the above table.



Back to the CoP portal site

Back to the KAGIANA project homepage