Gene omics information

Query gene ID GmaAffx.56681.1.S1_at
Gene name
Organism Glycine max


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.8893.4GmaAffx.56681.1.S1_atCA938383--8e-1At2g20720pentatricopeptide (PPR) repeat-containing proteinS.X.H.G.
0.5778.8Gma.5722.1.S1_atBU546228--1e-14At4g24100protein kinase family proteinS.X.H.G.
0.5374.2Gma.16949.1.S1_atBI945119--1e-4At1g01650aspartic-type endopeptidase/ peptidaseS.X.H.G.
0.5071.7Gma.8562.1.S1_atBE820414--2e-22At1g02100leucine carboxyl methyltransferase family proteinS.X.H.G.
0.4867.7Gma.2628.1.A1_s_atBE823748--4e+0At4g12850far-red impaired responsive family protein / FAR1 family proteinS.X.H.G.
0.4766.6Gma.5114.1.A1_atBI425032--4e-7At3g59500integral membrane HRF1 family proteinS.X.H.G.
0.4563.9Gma.16791.1.S1_atCD413628--5e-26At5g28350-S.X.H.G.
0.4259.3GmaAffx.665.3.S1_atBE440512--2e-11At5g63880VPS20.1S.X.H.G.
0.3954.5Gma.4466.1.S1_atBQ629041--2e-13At5g48160OBE2 (OBERON2)S.X.H.G.
0.3853.3Gma.13346.1.S1_atCD391281--6e-12At1g61780postsynaptic protein-relatedS.X.H.G.
Click here to hide the above table.


Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
8.799.1GSM191088Soybean_Cotyledon_II2GSE7881Expression data from soybean seed compartments with embryos at the cotyledon stage
7.498.9GSM191087Soybean_Cotyledon_II1GSE7881Expression data from soybean seed compartments with embryos at the cotyledon stage
6.098.5GSM191079Soybean_Cotyledon_ES1GSE7881Expression data from soybean seed compartments with embryos at the cotyledon stage
3.997.1GSM182043Laser capture microdissected (LCM) inner integument at the heart stage, biological replicate 1GSE7511Expression data from soybean seed compartments with embryos at the heart stage
3.997.1GSM147951Laser capture microdissected (LCM) inner integument at the globular stage, biological replicate 1GSE6414Expression data from soybean seed compartments with embryos at the globular stage
3.696.7GSM182044Laser capture microdissected (LCM) inner integument at the heart stage, biological replicate 2GSE7511Expression data from soybean seed compartments with embryos at the heart stage
3.596.6GSM191080Soybean_Cotyledon_ES2GSE7881Expression data from soybean seed compartments with embryos at the cotyledon stage
3.396.2GSM201130Laser capture microdissected (LCM) endosperm at the heart stage, biological replicate 3GSE7511Expression data from soybean seed compartments with embryos at the heart stage
3.195.8GSM29333322_1549.1Q.R078L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.095.6GSM29361342_2054.2B.R307P, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
Click here to hide the above table.


Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.033e-136GmaAffx.90445.1.S1_s_atCF806170--9e-2At1g51010unknown proteinC.G.S.X.
0.043e-136GmaAffx.66363.1.S1_s_atAW203473--3e+0At3g23600dienelactone hydrolase family proteinC.G.S.X.
0.023e-136Gma.11208.1.S1_atBQ453969--2e-3At3g23600dienelactone hydrolase family proteinC.G.S.X.
0.041e+034GmaAffx.85434.1.S1_atBG882734--4e+0At1g60985SCRL6 (SCR-Like 6)C.G.S.X.
0.031e+034Gma.9069.1.S1_atCA782249geranyl-diphosphate synthase-4e-1At2g15590unknown proteinC.G.S.X.
0.021e+034Gma.7287.1.S1_atBE823827--2e-10At5g24400emb2024 (embryo defective 2024)C.G.S.X.
0.031e+034Gma.6977.1.A1_atCD408801--2e+0At3g13740URF 4-relatedC.G.S.X.
0.015e+032PsAffx.C8000103_atPsAffx.C8000103--2e-1At5g55810AtNMNAT (A. thaliana nicotinate/nicotinamide mononucleotide adenyltransferase)C.G.S.X.
0.035e+032GmaAffx.86600.1.S1_atBG154914--5e+0At5g15802unknown proteinC.G.S.X.
Click here to hide the above table.



Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.038e-134Arabidopsis thalianaAt2g20720816600pentatricopeptide (PPR) repeat-containing proteinF:unknown;P:biological_process unknown;C:cellular_component unknown;PO---C.G.S.X.
0.066e+030Hordeum vulgareHVSMEh0094K14f_s_atHVSMEh0094K14f--5e+0At3g12170DNAJ heat shock N-terminal domain-containing proteinC.G.S.X.
0.022e+034Oryza sativaOs.54558.1.S1_at---0C.G.S.X.
0.035e+032Populus trichocarpaPtpAffx.62759.1.A1_atCV267227hypothetical protein-5e+0At4g16566histidine triad family protein / HIT family proteinC.G.S.X.
0.043e+032Triticum aestivumTa.7871.3.S1_a_atCA636480--7e-1At1g70470unknown proteinC.G.S.X.
0.041e+032Vitis vinifera1611642_atCF404721--9e+0Atcg00330-C.G.S.X.
0.056e+030Zea maysZmAffx.681.1.A1_atAI734682--4e-1At5g59470PQ-loop repeat family protein / transmembrane family proteinC.G.S.X.
Click here to hide the above table.


Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
Click here to hide the above table.


Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
Click here to hide the above table.



Back to the CoP portal site

Back to the KAGIANA project homepage