Gene omics information

Query gene ID GmaAffx.56390.1.S1_at
Gene name
Organism Glycine max


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.9198.6GmaAffx.56390.1.S1_atBU927504--9e-7At3g10530transducin family protein / WD-40 repeat family proteinS.X.H.G.
0.4259.3Gma.6121.3.S1_atBM885917--3e-4At1g31970STRS1 (STRESS RESPONSE SUPPRESSOR 1)S.X.H.G.
0.1721.2Gma.2819.2.S1_atBG510963--4e-16At1g72550tRNA synthetase beta subunit family proteinS.X.H.G.
0.069.0GmaAffx.8247.1.S1_atAW311073--1e+0At4g30680MA3 domain-containing proteinS.X.H.G.
0.047.0Gma.2422.2.S1_atCF922564--1e-44At5g05010clathrin adaptor complexes medium subunit-relatedS.X.H.G.
0.024.5GmaAffx.92769.1.S1_s_atCF808494--1e-75At3g19760eukaryotic translation initiation factor 4A, putative / eIF-4A, putative / DEAD box RNA helicase, putativeS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
8.599.1GSM309530storage protein suppression expt, RNAi biol rep2, tech rep1GSE12314Storage Protein Suppression in Transgenic Soybean Cotyledons
6.998.8GSM309529storage protein suppression expt, RNAi biol rep1, tech rep1GSE12314Storage Protein Suppression in Transgenic Soybean Cotyledons
6.698.7GSM309557storage protein suppression expt, RNAi biol rep1, tech rep2GSE12314Storage Protein Suppression in Transgenic Soybean Cotyledons
6.598.7GSM309531storage protein suppression expt, RNAi biol rep2, tech rep2GSE12314Storage Protein Suppression in Transgenic Soybean Cotyledons
6.398.6GSM29306061_C034.1N.R9N3P, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
6.098.5GSM29292395_1465.1L.R283L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
5.598.3GSM29304951_C020.1N.R9N1P, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
5.198.1GSM29444716_2526.2K.R230P, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
5.198.1GSM17169331_Z.I.M.5, Experimental replicate ZGSE7124Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistance
5.198.1GSM29220870_C004.1A.R9A1P, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.032e-240Gma.3309.1.S1_atBE821442--7e+0At5g48655zinc finger (C3HC4-type RING finger) family proteinC.G.S.X.
0.023e-136PsAffx.C225000017_atPsAffx.C225000017--1e+1At5g10970zinc finger (C2H2 type) family proteinC.G.S.X.
0.011e+034PsAffx.C18000110_atPsAffx.C18000110--5e-1At1g49760PAB8 (POLY(A) BINDING PROTEIN 8)C.G.S.X.
0.031e+034GmaAffx.77678.1.S1_atBM108233ubiquitin carrier protein 4-2e-42At1g63800UBC5 (ubiquitin-conjugating enzyme 5)C.G.S.X.
0.031e+034GmaAffx.28968.1.S1_atBU546617--3e-1At3g12955auxin-responsive protein-relatedC.G.S.X.
0.031e+034GmaAffx.20339.1.S1_atBI700796--1e+0At1g11970-C.G.S.X.
0.031e+034Gma.3233.1.S1_s_atM64267.1Fe-superoxide dismutase-6e-13At4g25100FSD1 (FE SUPEROXIDE DISMUTASE 1)C.G.S.X.
0.031e+034Gma.3233.1.S1_atM64267.1Fe-superoxide dismutase-6e-13At4g25100FSD1 (FE SUPEROXIDE DISMUTASE 1)C.G.S.X.
0.045e+032PsAffx.psMA012xI02f_atPsAffx.psMA012xI02f--1e-2At5g67270ATEB1C (microtubule end binding protein 1)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.179e-754Arabidopsis thalianaAt3g10530820218transducin family protein / WD-40 repeat family proteinF:nucleotide binding;P:biological_process unknown;C:CUL4 RING ubiquitin ligase complex;BMFOPA---C.G.S.X.
0.042e+032Hordeum vulgareEBro08_SQ003_F16_atEBro08_SQ003_F16--6e-1At3g48800sterile alpha motif (SAM) domain-containing proteinC.G.S.X.
0.032e+034Oryza sativaOs03g0684300AK102497.1-Conserved hypothetical protein7e+0At2g39540gibberellin-regulated family proteinC.G.S.X.
0.211e-40167Populus trichocarpaPtpAffx.209444.1.S1_atpmrna18709hypothetical protein-3e-28At3g10530transducin family protein / WD-40 repeat family proteinC.G.S.X.
0.041e+130Triticum aestivumTaAffx.83962.1.S1_atCA647257--3e+0At1g78995unknown proteinC.G.S.X.
0.031e+032Vitis vinifera1611863_atCB344118--2e-1At4g15510photosystem II reaction center PsbP family proteinC.G.S.X.
0.034e-134Zea maysZm.1175.1.A1_atBE511813--3e-1At1g53625unknown proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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