Gene omics information

Query gene ID GmaAffx.54770.1.S1_at
Gene name
Organism Glycine max


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.8291.9GmaAffx.54770.1.S1_atBI321317--1e-10At5g59820RHL41 (RESPONSIVE TO HIGH LIGHT 41)S.X.H.G.
0.4968.3Gma.2821.2.S1_a_atBI469945PR-5 protein-2e-2At4g11650ATOSM34 (osmotin 34)S.X.H.G.
0.4968.3Gma.1082.1.S1_atAF243374.1glutathione S-transferase GST 19-5e-1At2g29420ATGSTU7 (ARABIDOPSIS THALIANA GLUTATHIONE S-TRANSFERASE TAU 7)S.X.H.G.
0.4463.3GmaAffx.69792.1.S1_s_atBU550596--3e-8At5g64750ABR1 (ABA REPRESSOR1)S.X.H.G.
0.4360.6Gma.2821.2.S1_atBI469945PR-5 protein-2e-2At4g11650ATOSM34 (osmotin 34)S.X.H.G.
0.4158.1GmaAffx.42847.1.S1_s_atBU578388--5e-12At2g14580ATPRB1S.X.H.G.
0.4057.1Gma.7728.1.S1_atBI942310--8e-25At3g215001-deoxy-D-xylulose-5-phosphate synthaseS.X.H.G.
0.3853.3GmaAffx.18924.1.S1_atBU546215--1e-5At2g18950HPT1 (HOMOGENTISATE PHYTYLTRANSFERASE 1)S.X.H.G.
0.3853.3GmaAffx.15262.1.S1_atBI469858--2e+0At5g16480tyrosine specific protein phosphatase family proteinS.X.H.G.
0.3751.7GmaAffx.28803.1.S1_atBQ742488--9e-7At5g62150peptidoglycan-binding LysM domain-containing proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
44.399.9GSM29301520_1089.1N.R055L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
23.799.8GSM2930807_C033.1N.R9N3L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
21.999.8GSM29279151_1403.1K.R250L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
21.399.8GSM29224049_C033.1B.R9B3L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
20.899.7GSM29467243_3233.2M.R9M3L, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
20.799.7GSM2924059_C101.1F.R9F2L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
19.499.7GSM29216114-C017.1A.R9A3L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
19.099.7GSM29273075_C165.1J.R9J1L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
18.499.7GSM29279353_C197.1K.R9K3L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
17.999.7GSM29228431_1193.1E.R117L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.118e-1373GmaAffx.90234.1.S1_atCF805959--1e-3At2g37430zinc finger (C2H2 type) family protein (ZAT11)C.G.S.X.
0.158e-1373GmaAffx.83888.1.S1_s_atBM527789--4e-3At5g59820RHL41 (RESPONSIVE TO HIGH LIGHT 41)C.G.S.X.
0.158e-1373GmaAffx.83888.1.S1_atBM527789--4e-3At5g59820RHL41 (RESPONSIVE TO HIGH LIGHT 41)C.G.S.X.
0.073e-652Gma.986.1.S1_atAI959966--2e-6At2g37430zinc finger (C2H2 type) family protein (ZAT11)C.G.S.X.
0.051e-240GmaAffx.88126.1.S1_atBU761048--1e-37At2g27210kelch repeat-containing serine/threonine phosphoesterase family proteinC.G.S.X.
0.034e-238PsAffx.C64000023_atPsAffx.C64000023--5e-1At5g15970KIN2C.G.S.X.
0.014e-238PsAffx.C248000003_atPsAffx.C248000003--3e-4At5g07600oleosin / glycine-rich proteinC.G.S.X.
0.024e-238PsAffx.C24000053_atPsAffx.C24000053--3e+0At3g16280DNA binding / transcription factorC.G.S.X.
0.014e-238PsAffx.C225000014_atPsAffx.C225000014--3e+0At4g34300glycine-rich proteinC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.131e-1065Arabidopsis thalianaAt5g59820836103RHL41 (RESPONSIVE TO HIGH LIGHT 41)Encodes a zinc finger protein involved in high light and cold acclimation. Overexpression of this putative transcription factor increases the expression level of 9 cold-responsive genes and represses the expression level of 15 cold-responsive genes, including CBF genes. Also, lines overexpressing this gene exhibits a small but reproducible increase in freeze tolerance. Because of the repression of the CBF genes by the overexpression of this gene, the authors speculate that this gene may be involved in negative regulatory circuit of the CBF pathway.---C.G.S.X.
0.071e-342Hordeum vulgareContig4489_s_atContig4489--3e+0At2g29525-C.G.S.X.
0.076e-238Oryza sativaOsAffx.2885.1.S1_at---0C.G.S.X.
0.124e-857Populus trichocarpaPtp.7321.1.S1_atDN498339hypothetical protein-1e-1At2g28710zinc finger (C2H2 type) family proteinC.G.S.X.
0.081e-136Triticum aestivumTaAffx.112464.1.S1_atCA623716--3e+0At4g16930disease resistance protein (TIR-NBS-LRR class), putativeC.G.S.X.
0.089e-338Vitis vinifera1614332_s_atCA814568hypothetical protein LOC100265533-4e-4At2g28710zinc finger (C2H2 type) family proteinC.G.S.X.
0.065e-236Zea maysZmAffx.820.1.A1_atAI770463Hypothetical protein LOC100217195-8e-1At5g23950C2 domain-containing proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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