Gene omics information

Query gene ID GmaAffx.54104.1.S1_at
Gene name
Organism Glycine max


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.9198.6GmaAffx.54104.1.S1_atBF069245--2e-1At4g15510photosystem II reaction center PsbP family proteinS.X.H.G.
0.2939.0GmaAffx.29482.2.S1_atBM309632--4e+0At1g22970unknown proteinS.X.H.G.
0.058.0GmaAffx.49577.1.S1_atBU549109--4e-20At1g56590clathrin adaptor complexes medium subunit family proteinS.X.H.G.
0.047.0GmaAffx.64310.1.S1_atAW277890--3e-13At2g41150unknown proteinS.X.H.G.
0.024.5Gma.6495.1.S1_atBQ612701--5e-51At3g25800PP2AA2 (PROTEIN PHOSPHATASE 2A SUBUNIT A2)S.X.H.G.
0.024.5GmaAffx.77438.1.S1_s_atAW831599--4e-31At4g09520catalytic/ metal ion binding / phosphoglycerate mutaseS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
4.897.9GSM24485628_V71.I1W2.CEL, Experimental replicate 2GSE9687Expression patterns in time and space during P.sojae infection of soybean cultivars differing in quantitative resistance
4.597.7GSM267287Axillary meristem from 10-day-old soybean seedlings GSE10607Genome-wide analysis of gene expression in the soybean shoot apical meristem
4.297.4GSM308556Mature Soybean (Glycine max) pollen grains replicate 1GSE12286Genomic Expression Profiling of Mature Soybean (Glycine max) Pollen
4.097.2GSM29283818_C211.1L.SLL3L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.897.0GSM29442984_2437.2J.R091U, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.796.8GSM29343626_1624.1R.R298P, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.496.4GSM29434810_3163.2J.SLJ1L, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.496.4GSM29426823_2428.2I.R297P, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.396.2GSM29337863_C077.1Q.SLQ1L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.396.2GSM2944358_2441.2J.R198L, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.045e+032PsAffx.CL1668Contig1_atPsAffx.CL1668Contig1--6e-1At1g57906-C.G.S.X.
0.015e+032PsAffx.C86000039_atPsAffx.C86000039--2e-2At1g69935SHW1 (SHORT HYPOCOTYL IN WHITE LIGHT1)C.G.S.X.
0.015e+032PsAffx.C77000046_atPsAffx.C77000046--5e-1At2g28000CPN60A (CHAPERONIN-60ALPHA)C.G.S.X.
0.015e+032PsAffx.C41000007_atPsAffx.C41000007--4e-1At2g35765unknown proteinC.G.S.X.
0.025e+032PsAffx.C36000032_atPsAffx.C36000032--2e+0At1g57906-C.G.S.X.
0.015e+032PsAffx.C25000066_atPsAffx.C25000066--5e+0At4g28830methyltransferase/ nucleic acid bindingC.G.S.X.
0.035e+032PsAffx.C254000008_atPsAffx.C254000008--5e+0At1g14890enzyme inhibitor/ pectinesterase/ pectinesterase inhibitorC.G.S.X.
0.015e+032PsAffx.C208000011_atPsAffx.C208000011--6e-3At5g04890RTM2 (RESTRICTED TEV MOVEMENT 2)C.G.S.X.
0.015e+032PsAffx.C110000020_atPsAffx.C110000020--8e-3At1g68050FKF1 (FLAVIN-BINDING, KELCH REPEAT, F BOX 1)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.032e-136Arabidopsis thalianaAt4g15510827223photosystem II reaction center PsbP family proteinF:calcium ion binding;P:photosynthesis;C:in 9 components;PBO---C.G.S.X.
0.052e+032Hordeum vulgareHVSMEc0007M19r2_atHVSMEc0007M19r2--8e+0At5g25890IAA28 (INDOLE-3-ACETIC ACID INDUCIBLE 28)C.G.S.X.
0.044e-136Oryza sativaOs10g05624009638.m03761--1e+0At5g67245unknown proteinC.G.S.X.
0.041e+034Populus trichocarpaPtpAffx.203933.1.S1_atpmrna7763hypothetical protein-5e-2At1g09740ethylene-responsive protein, putativeC.G.S.X.
0.079e-134Triticum aestivumTaAffx.121250.1.S1_atBG906548--2e-1At5g24460unknown proteinC.G.S.X.
0.044e+030Vitis vinifera1621208_atCF568900--3e-10At5g22400rac GTPase activating protein, putativeC.G.S.X.
0.034e-134Zea maysZm.4807.1.A1_atCO518291hypothetical protein LOC100273970-1e+0At3g60286unknown proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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