Gene omics information

Query gene ID GmaAffx.52867.1.A1_at
Gene name
Organism Glycine max


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.9499.2GmaAffx.52867.1.A1_atAW310514--3e-15At2g16860GCIP-interacting family proteinS.X.H.G.
0.5071.7Gma.4412.1.S1_x_atL28002.1TATA-box binding protein-4e-51At1g55520TBP2 (TATA BINDING PROTEIN 2)S.X.H.G.
0.4463.3Gma.10609.1.S1_atAW350454GMFP4-1e-8At1g32400TOM2A (TOBAMOVIRUS MULTIPLICATION 2A)S.X.H.G.
0.3650.8Gma.2357.1.S1_atCD391218--9e-9At1g76940RNA recognition motif (RRM)-containing proteinS.X.H.G.
0.3548.6Gma.7903.1.A1_atBG653026--2e+0At1g13330-S.X.H.G.
0.3548.6Gma.10825.1.S1_atCD407330--1e-3At3g01435Expressed proteinS.X.H.G.
0.3548.6Gma.5562.1.S1_a_atAW348762--4e-7At2g47070SPL1 (SQUAMOSA PROMOTER BINDING PROTEIN-LIKE 1)S.X.H.G.
0.3447.2Gma.1925.1.S1_atAW310700--5e-33At1g69010BIM2 (BES1-interacting Myc-like protein 2)S.X.H.G.
0.3243.7Gma.17588.2.S1_a_atAW351318--9e-1Atmg00860-S.X.H.G.
0.3142.2Gma.1266.1.S1_a_atBU548161--2e-2At4g12650-S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
7.799.0GSM308559Mature Soybean (Glycine max) pollen grains Replicate 2GSE12286Genomic Expression Profiling of Mature Soybean (Glycine max) Pollen
5.498.2GSM308560Mature Soybean (Glycine max) pollen grains Replicate 3GSE12286Genomic Expression Profiling of Mature Soybean (Glycine max) Pollen
4.897.9GSM29321595_C050.1O.SLO3P, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.797.8GSM308556Mature Soybean (Glycine max) pollen grains replicate 1GSE12286Genomic Expression Profiling of Mature Soybean (Glycine max) Pollen
4.397.5GSM29333322_1549.1Q.R078L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.397.5GSM29217329-C006.1A.SLA1P, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.997.1GSM184829Whole Seed at the globular stage, biological replicate 2GSE6414Expression data from soybean seed compartments with embryos at the globular stage
3.796.8GSM29217733_1020.1A.R011P, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.796.8GSM258504Soybean shoot apical meristem, 4 short-day replicate BGSE10251Gene expression profiling implicates novel hormonal regulation of the floral initiation process in soybeans
3.696.7GSM29217631-1007.1A.R004L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.565e-92337Gma.1143.1.A1_atAW278604--4e-6At2g16860GCIP-interacting family proteinC.G.S.X.
0.053e-136PsAffx.psMA009xK23f_atPsAffx.psMA009xK23f--8e+0At5g55460protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinC.G.S.X.
0.024e+032PsAffx.C41000021_atPsAffx.C41000021--3e+0At2g37910cation/hydrogen exchanger, putative (CHX21)C.G.S.X.
0.014e+032PsAffx.C348000001_atPsAffx.C348000001--6e-2At5g66350SHI (SHORT INTERNODES)C.G.S.X.
0.014e+032PsAffx.C298000005_atPsAffx.C298000005--3e-2At1g64680unknown proteinC.G.S.X.
0.014e+032PsAffx.C180000030_atPsAffx.C180000030--8e-1At3g07160ATGSL10 (glucan synthase-like 10)C.G.S.X.
0.024e+032PsAffx.C1121000001_atPsAffx.C1121000001--3e+0At4g34470ASK12 (ARABIDOPSIS SKP1-LIKE 12)C.G.S.X.
0.044e+032GmaAffx.59422.1.S1_atBI425570--3e+0At5g38890exoribonuclease-relatedC.G.S.X.
0.034e+032GmaAffx.443.1.A1_atAW761453--9e-2At4g08039-C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.173e-1581Arabidopsis thalianaAt2g16860816187GCIP-interacting family proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;OMFPBAV---C.G.S.X.
0.072e-1167Hordeum vulgareContig9446_atContig9446--1e-11At2g16860GCIP-interacting family proteinC.G.S.X.
0.072e-859Oryza sativaOs06g0711600AK064384.1-Conserved hypothetical protein8e-10At2g16860GCIP-interacting family proteinC.G.S.X.
0.214e-46184Populus trichocarpaPtpAffx.146199.3.A1_atDN487009hypothetical protein-5e-22At2g16860GCIP-interacting family proteinC.G.S.X.
0.095e-857Triticum aestivumTa.2717.1.S1_atCD925881--4e-11At2g16860GCIP-interacting family proteinC.G.S.X.
0.311e-36151Vitis vinifera1611655_atCB913871--3e-32At2g16860GCIP-interacting family proteinC.G.S.X.
0.075e-340Zea maysZm.18066.1.A1_atAI738164hypothetical protein LOC100272811-3e-2At2g16860GCIP-interacting family proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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