Gene omics information

Query gene ID	GmaAffx.5182.2.S1_at
Gene name
Organism	Glycine max

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.80	91.5	GmaAffx.5182.2.S1_at	AW186428	-	-	4e-15	At3g27460	unknown protein	S.X.	H.G.	Please select
0.65	83.8	GmaAffx.93491.1.S1_s_at	CF809216	-	-	3e-1	At4g38280	unknown protein	S.X.	H.G.	Please select
0.60	80.7	GmaAffx.84623.1.S1_at	BQ298236	-	-	1e-12	At1g05500	NTMC2T2.1	S.X.	H.G.	Please select
0.56	78.2	GmaAffx.90426.1.S1_s_at	CF806151	urease accessory protein UreF	-	7e-7	At1g21840	UREF (urease accessory protein F)	S.X.	H.G.	Please select
0.52	73.1	GmaAffx.81094.1.S1_at	BG725380	-	-	8e-8	At4g33060	peptidyl-prolyl cis-trans isomerase cyclophilin-type family protein	S.X.	H.G.	Please select
0.48	67.7	GmaAffx.91054.1.S1_s_at	CF806779	-	-	2e-8	At1g04230	unknown protein	S.X.	H.G.	Please select
0.46	65.5	Gma.10781.2.A1_a_at	BU547846	-	-	5e-9	At3g54190	-	S.X.	H.G.	Please select
0.44	63.3	GmaAffx.82078.1.S1_at	BI424683	-	-	1e-27	At3g26420	ATRZ-1A	S.X.	H.G.	Please select
0.43	60.6	GmaAffx.55210.2.S1_at	BE330623	-	-	3e-32	At2g43070	protease-associated (PA) domain-containing protein	S.X.	H.G.	Please select
0.39	54.5	GmaAffx.92769.1.S1_s_at	CF808494	-	-	1e-75	At3g19760	eukaryotic translation initiation factor 4A, putative / eIF-4A, putative / DEAD box RNA helicase, putative	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
4.4	97.6	GSM309343	transgenic RNAiOleosin, biol rep 1, tech rep 1	GSE12300	Suppression of oleosin in soybean cotyledon
4.0	97.2	GSM309344	transgenic RNAiOleosin, biol rep 1, tech rep 2	GSE12300	Suppression of oleosin in soybean cotyledon
4.0	97.2	GSM293480	66_C092.1R.R9R1P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.9	97.1	GSM294132	86_3112.2G.R9G1P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.5	96.6	GSM293126	3_C038.1O.R9O1P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.5	96.6	GSM293247	34_C066.1P.R9P2P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.5	96.6	GSM292923	95_1465.1L.R283L, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.3	96.2	GSM292917	8_C216.1L.R9L3P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.1	95.8	GSM293565	78_2006.2A.R146P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.0	95.6	GSM293557	70_2036.2A.R165P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.04	7e-2	38	GmaAffx.14904.1.S1_at	BQ611571	-	-	2e-4	At1g77020	DNAJ heat shock N-terminal domain-containing protein	C.G.	S.X.	Please select
0.01	3e-1	36	PsAffx.C49000002_at	PsAffx.C49000002	-	-	4e+0	At1g02065	SPL8 (SQUAMOSA PROMOTER BINDING PROTEIN-LIKE 8)	C.G.	S.X.	Please select
0.04	3e-1	36	GmaAffx.48992.1.S1_at	BF597736	-	-	5e-12	At1g11880	transferase, transferring hexosyl groups	C.G.	S.X.	Please select
0.01	1e+0	34	Gma.7230.1.S1_at	BI970668	-	-	3e-16	At1g61010	CPSF73-I (CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR 73-I)	C.G.	S.X.	Please select
0.04	1e+0	34	Gma.12591.1.A1_at	CD391918	-	-	1e+1	At5g38960	germin-like protein, putative	C.G.	S.X.	Please select
0.01	5e+0	32	PsAffx.C94000017_at	PsAffx.C94000017	-	-	3e-1	At2g39805	integral membrane Yip1 family protein	C.G.	S.X.	Please select
0.01	5e+0	32	PsAffx.C474000002_at	PsAffx.C474000002	-	-	4e-2	At1g05920	DNA binding	C.G.	S.X.	Please select
0.01	5e+0	32	PsAffx.C278000002_at	PsAffx.C278000002	-	-	3e+0	At2g30680	-	C.G.	S.X.	Please select
0.01	5e+0	32	PsAffx.C252000002_s_at	PsAffx.C252000002	-	-	2e+0	At5g17990	TRP1 (tryptophan biosynthesis 1)	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.14	4e-15	81	Arabidopsis thaliana	At3g27460	822367	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:nucleus;MFPO	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.08	3e-14	77	Hordeum vulgare	Contig6718_s_at	Contig6718	-	-	1e-8	At5g40550	unknown protein	C.G.	S.X.	Please select
0.12	8e-15	81	Oryza sativa	OsAffx.31809.1.S1_at	-	-	-	0			C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.42	2e-45	182	Populus trichocarpa	Ptp.438.1.S1_at	CK317792	hypothetical protein	-	2e-18	At5g40550	unknown protein	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.08	1e-3	44	Triticum aestivum	Ta.9706.1.S1_a_at	BQ169555	-	-	3e-3	At5g40550	unknown protein	C.G.	S.X.	Please select
0.05	2e-1	34	Vitis vinifera	1614120_at	CB349861	-	-	4e-3	At5g40550	unknown protein	C.G.	S.X.	Please select
0.07	2e-8	57	Zea mays	Zm.18071.1.S1_at	CK849985	hypothetical protein LOC100273149	-	5e-5	At5g40550	unknown protein	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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