Gene omics information

Query gene ID	GmaAffx.48770.1.S1_at
Gene name
Organism	Glycine max

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.59	79.5	GmaAffx.48770.1.S1_at	BG046039	-	-	5e-50	At1g18070	EF-1-alpha-related GTP-binding protein, putative	S.X.	H.G.	Please select
0.80	91.5	Gma.4229.1.S1_at	CA851373	heat shock protein 70-related protein	-	1e-4	At1g79930	HSP91	S.X.	H.G.	Please select
0.71	87.8	GmaAffx.82170.2.S1_at	BI498349	-	-	4e-56	At1g10730	clathrin adaptor complexes medium subunit family protein	S.X.	H.G.	Please select
0.67	86.1	GmaAffx.92119.1.S1_s_at	CF807844	-	-	2e-11	At1g04850	ubiquitin-associated (UBA)/TS-N domain-containing protein	S.X.	H.G.	Please select
0.57	78.8	GmaAffx.63765.1.S1_at	BE806788	-	-	2e-70	At2g47250	RNA helicase, putative	S.X.	H.G.	Please select
0.33	46.1	GmaAffx.82885.1.S1_at	BM731847	-	-	3e-70	At3g62120	tRNA synthetase class II (G, H, P and S) family protein	S.X.	H.G.	Please select
0.32	43.7	GmaAffx.93620.1.S1_s_at	CF809345	-	-	3e-19	At3g61140	FUS6 (FUSCA 6)	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
3.1	95.8	GSM293617	46_3031.2B.R9B3U, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
2.9	95.4	GSM293613	42_2054.2B.R307P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
2.6	94.5	GSM293221	10_1541.1P.R051L, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
2.5	94.2	GSM293722	57_2117.2C.R248U, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
2.4	93.8	GSM293727	61_2117.2C.R248L, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
2.4	93.8	GSM293950	95_2213.2E.R168U, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
2.4	93.8	GSM292178	34-1006.1A.R003P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
2.3	93.3	GSM293389	73_C079.1Q.R9Q2U, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
2.2	92.8	GSM293877	29_3084.2E.R9E2P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
2.2	92.8	GSM294243	91_3137.2H.R9H2U, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.12	4e-45	182	Gma.6450.1.S1_at	CD401012	-	-	6e-22	At1g18070	EF-1-alpha-related GTP-binding protein, putative	C.G.	S.X.	Please select
0.03	4e-2	40	GmaAffx.12305.1.S1_at	BE022059	-	-	8e-1	At3g24513	-	C.G.	S.X.	Please select
0.00	6e-1	36	PsAffx.C45000015_at	PsAffx.C45000015	-	-	2e-1	At5g60030	unknown protein	C.G.	S.X.	Please select
0.04	6e-1	36	GmaAffx.8626.2.S1_at	BI785600	-	-	7e-27	At2g25280	-	C.G.	S.X.	Please select
0.02	6e-1	36	Gma.11087.1.S1_at	AW119547	-	-	1e-22	At1g72470	ATEXO70D1 (exocyst subunit EXO70 family protein D1)	C.G.	S.X.	Please select
0.00	2e+0	34	PsAffx.C84000006_at	PsAffx.C84000006	-	-	8e+0	At5g62290	nucleotide-sensitive chloride conductance regulator (ICln) family protein	C.G.	S.X.	Please select
0.01	2e+0	34	PsAffx.C70000041_at	PsAffx.C70000041	-	-	4e-2	At1g03550	secretory carrier membrane protein (SCAMP) family protein	C.G.	S.X.	Please select
0.02	2e+0	34	PsAffx.C2000070_at	PsAffx.C2000070	-	-	6e-1	At5g57750	zinc finger (C3HC4-type RING finger) family protein	C.G.	S.X.	Please select
0.02	2e+0	34	GmaAffx.90276.1.S1_s_at	CF806001	-	-	3e-1	At4g23470	hydroxyproline-rich glycoprotein family protein	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.39	5e-50	198	Arabidopsis thaliana	At1g18070	838387	EF-1-alpha-related GTP-binding protein, putative	F:translation factor activity, nucleic acid binding, GTP binding, translation release factor activity, GTPase activity;P:translational termination;C:vacuole;BMOFPA	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.10	2e-4	46	Hordeum vulgare	Contig10496_at	Contig10496	-	-	1e-17	At1g18070	EF-1-alpha-related GTP-binding protein, putative	C.G.	S.X.	Please select
0.27	9e-41	169	Oryza sativa	Os02g0456200	9630.m02430	-	G1 to S phase transition protein 1 homolog	1e-33	At1g18070	EF-1-alpha-related GTP-binding protein, putative	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.38	5e-140	498	Populus trichocarpa	PtpAffx.70877.1.S1_at	CK091176	hypothetical protein	-	3e-112	At1g18070	EF-1-alpha-related GTP-binding protein, putative	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.20	5e-50	198	Triticum aestivum	Ta.7532.2.S1_at	CD928299	GTP-binding protein	-	2e-29	At1g18070	EF-1-alpha-related GTP-binding protein, putative	C.G.	S.X.	Please select
0.45	1e-112	404	Vitis vinifera	1619744_at	CF208885	hypothetical protein LOC100249117	-	2e-94	At1g18070	EF-1-alpha-related GTP-binding protein, putative	C.G.	S.X.	Please select
0.02	1e+1	30	Zea mays	ZmAffx.951.1.S1_at	AI833422	-	-	8e-1	At1g60970	clathrin adaptor complex small chain family protein	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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