CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID GmaAffx.46686.1.S1_at

Gene name

Organism Glycine max

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.95 99.4 GmaAffx.46686.1.S1_at BQ081277 - - 1e-5 At1g07570 APK1A S.X. H.G.
0.53 74.2 Gma.5491.1.S1_at AW309940 - - 1e+1 At5g51105 unknown protein S.X. H.G.
0.52 73.1 Gma.3639.1.S1_at AB083030.1 syringolide-induced protein B15-3-5 - 1e-4 At2g38600 acid phosphatase class B family protein S.X. H.G.
0.44 63.3 GmaAffx.91013.1.S1_s_at CF806738 - - 5e+0 At5g51105 unknown protein S.X. H.G.
0.33 46.1 GmaAffx.4941.1.S1_at BI971689 - - 6e-1 At2g31170 SYCO ARATH S.X. H.G.
0.29 39.0 Gma.7325.1.S1_at BI893997 - - 2e+0 At1g53625 unknown protein S.X. H.G.
0.29 39.0 Gma.2457.1.S1_at BI967559 - - 2e+0 At1g61795 - S.X. H.G.
0.25 32.6 GmaAffx.89508.1.A1_s_at CK606172 - - 4e-1 At3g10340 PAL4 (Phenylalanine ammonia-lyase 4) S.X. H.G.
0.24 30.9 Gma.11238.1.S1_at BQ454110 - - 3e-121 At5g60600 HDS (4-HYDROXY-3-METHYLBUT-2-ENYL DIPHOSPHATE SYNTHASE) S.X. H.G.
0.23 29.9 GmaAffx.90026.1.S1_s_at CF805751 - - 5e-18 At5g60600 HDS (4-HYDROXY-3-METHYLBUT-2-ENYL DIPHOSPHATE SYNTHASE) S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
12.5 99.5 GSM294044 93_2261.2F.R205L, Experimental replicate 2 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
10.7 99.4 GSM292645 72_1339.1I.R213L, Experimental replicate 1 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
10.4 99.3 GSM293600 30_2081.2B.R035L, Experimental replicate 2 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
10.3 99.3 GSM292913 86_1447.1L.R273L, Experimental replicate 1 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
9.8 99.3 GSM292791 51_1403.1K.R250L, Experimental replicate 1 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
9.6 99.2 GSM293524 40_2027.2A.R196L, Experimental replicate 2 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
9.1 99.2 GSM294040 8_2273.2F.R139L, Experimental replicate 2 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
9.0 99.2 GSM292289 36_C081.1E.SLE2L, Experimental replicate 1 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
9.0 99.2 GSM292330 77_C077.1E.SLE1L, Experimental replicate 1 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
8.1 99.0 GSM293078 78_1065.1N.R039L, Experimental replicate 1 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.26 9e-23 107 Gma.3830.1.S1_at BE658289 - - 4e-17 At1g07570 APK1A C.G. S.X.
0.20 2e-20 99 Gma.4062.1.S1_at BI969642 - - 2e-10 At5g02290 NAK C.G. S.X.
0.17 6e-18 91 Gma.3104.1.A1_at BG839320 - - 1e+0 At1g67740 PSBY C.G. S.X.
0.16 1e-15 83 Gma.3111.2.S1_a_at BQ740743 - - 5e-27 At1g07570 APK1A C.G. S.X.
0.16 1e-15 83 Gma.3111.2.S1_at BQ740743 - - 5e-27 At1g07570 APK1A C.G. S.X.
0.14 1e-6 54 GmaAffx.8472.1.S1_at AW350979 - - 2e-40 At3g01300 protein kinase, putative C.G. S.X.
0.04 5e-6 52 Gma.11041.1.S1_at BI970555 - - 1e-79 At2g47060 serine/threonine protein kinase, putative C.G. S.X.
0.05 7e-5 48 GmaAffx.81783.1.S1_at AW101961 - - 2e-10 At5g35580 ATP binding / kinase/ protein kinase/ protein serine/threonine kinase/ protein tyrosine kinase C.G. S.X.
0.07 7e-5 48 Gma.7482.2.S1_at AI736575 - - 5e-27 At2g17220 protein kinase, putative C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.10 1e-5 50 Arabidopsis thaliana At1g07570 837271 APK1A Protein kinase capable of phosphorylating tyrosine, serine, and threonine residues - - - C.G. S.X.
0.14 4e-10 63 Hordeum vulgare Contig17814_at Contig17814 - - 1e-25 At3g01300 protein kinase, putative C.G. S.X.
0.09 2e-9 63 Oryza sativa Os01g0973500 AK069546.1 - Protein kinase APK1A (EC 2.7.1.-) 7e-48 At1g07570 APK1A C.G. S.X.
0.20 2e-11 69 Populus trichocarpa PtpAffx.136078.1.A1_at CK089933 hypothetical protein - 1e-9 At1g07570 APK1A C.G. S.X.
0.13 6e-5 48 Triticum aestivum Ta.12685.1.S1_at CA722001 - - 1e-1 At2g28930 APK1B C.G. S.X.
0.13 2e-14 77 Vitis vinifera 1607675_at CD011506 hypothetical protein LOC100253466 - 3e-11 At1g07570 APK1A C.G. S.X.
0.19 1e-13 75 Zea mays Zm.13689.1.A1_at CD441118 hypothetical protein LOC100279389 - 1e-19 At1g07570 APK1A C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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