Gene omics information

Query gene ID GmaAffx.4467.2.S1_at
Gene name
Organism Glycine max


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.6786.1GmaAffx.4467.2.S1_atBQ452979--2e-11At4g35300TMT2 (TONOPLAST MONOSACCHARIDE TRANSPORTER2)S.X.H.G.
0.4665.5GmaAffx.93337.1.S1_s_atCF809062--1e+0At4g31130unknown proteinS.X.H.G.
0.4463.3Gma.5327.1.A1_atAW317220--2e-24At2g26640KCS11 (3-KETOACYL-COA SYNTHASE 11)S.X.H.G.
0.3853.3GmaAffx.87457.1.S1_atBM177734--1e-50At5g50375CPI1 (CYCLOPROPYL ISOMERASE)S.X.H.G.
0.3650.8Gma.8846.2.S1_atBM107812--6e-15At5g42420transporter-relatedS.X.H.G.
0.2939.0GmaAffx.16792.1.S1_atAI736487--4e-21At2g26640KCS11 (3-KETOACYL-COA SYNTHASE 11)S.X.H.G.
0.2430.9Gma.13580.2.S1_x_atAW780839tubulin A-3e-139At1g50010TUA2S.X.H.G.
Click here to hide the above table.


Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
15.399.6GSM238041Soybean-Bayfield-4-RMAGSE9374Exploration of microarrays as tools to assess substantial equivalence of genetically modified soybeans
13.599.5GSM245933Leaf_Water Control_Rep 1_48 h After TreatmentGSE9730Effect of foliar spray of lipo-chitooligosaccharide (Nod factor) on soybean leaf gene expression.
13.199.5GSM245935Leaf_Water Control_Rep 3_48 h After TreatmentGSE9730Effect of foliar spray of lipo-chitooligosaccharide (Nod factor) on soybean leaf gene expression.
12.999.5GSM245938Leaf_LCO treated_Rep 3_48 h After TreatmentGSE9730Effect of foliar spray of lipo-chitooligosaccharide (Nod factor) on soybean leaf gene expression.
12.699.5GSM245934Leaf_Water Control_Rep 2_48 h After TreatmentGSE9730Effect of foliar spray of lipo-chitooligosaccharide (Nod factor) on soybean leaf gene expression.
11.199.4GSM238060Soybean-S03W4-4-RMAGSE9374Exploration of microarrays as tools to assess substantial equivalence of genetically modified soybeans
10.199.3GSM245937Leaf_LCO treated_Rep 2_48 h After TreatmentGSE9730Effect of foliar spray of lipo-chitooligosaccharide (Nod factor) on soybean leaf gene expression.
9.299.2GSM238058Soybean-S03W4-2-RMAGSE9374Exploration of microarrays as tools to assess substantial equivalence of genetically modified soybeans
9.199.2GSM238056Soybean-PS46R-5-RMAGSE9374Exploration of microarrays as tools to assess substantial equivalence of genetically modified soybeans
9.199.2GSM238050Soybean-Mandarin-6-RMAGSE9374Exploration of microarrays as tools to assess substantial equivalence of genetically modified soybeans
Click here to hide the above table.


Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.131e-26121Gma.5561.1.A1_atBI969561--2e-8At3g51490TMT3 (TONOPLAST MONOSACCHARIDE TRANSPORTER3)C.G.S.X.
0.232e-654Gma.8384.1.A1_atBG881817--5e-4At4g35300TMT2 (TONOPLAST MONOSACCHARIDE TRANSPORTER2)C.G.S.X.
0.012e+034PsAffx.C84000007_atPsAffx.C84000007--2e+1At5g54970unknown proteinC.G.S.X.
0.022e+034PsAffx.C64000049_atPsAffx.C64000049--5e-1At3g06090unknown proteinC.G.S.X.
0.012e+034PsAffx.C121000031_atPsAffx.C121000031--3e+0At5g49100unknown proteinC.G.S.X.
0.032e+034GmaAffx.92112.1.S1_s_atCF807837--3e+0At2g35733unknown proteinC.G.S.X.
0.032e+034GmaAffx.66702.2.A1_atBQ473209--2e-1At5g11010pre-mRNA cleavage complex-relatedC.G.S.X.
0.032e+034GmaAffx.19189.1.S1_atBI973527--2e-4At2g05920subtilase family proteinC.G.S.X.
0.032e+034GmaAffx.12889.1.S1_atAW459827--2e-14At1g55570sks12 (SKU5 Similar 12)C.G.S.X.
Click here to hide the above table.



Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.102e-1169Arabidopsis thalianaAt4g35300829684TMT2 (TONOPLAST MONOSACCHARIDE TRANSPORTER2)F:carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity, nucleoside transmembrane transporter activity;P:in 6 processes;C:plasma membrane, vacuole, membrane;BFMPOA---C.G.S.X.
0.091e-550Hordeum vulgareContig6132_atContig6132--9e-8At4g35300TMT2 (TONOPLAST MONOSACCHARIDE TRANSPORTER2)C.G.S.X.
0.053e+034Oryza sativaOs05g04649009633.m03618--4e-1At4g30410transcription factorC.G.S.X.
0.351e-1067Populus trichocarpaPtp.7451.1.A1_s_atCV241535hypothetical protein-4e-23At1g20840TMT1 (TONOPLAST MONOSACCHARIDE TRANSPORTER1)C.G.S.X.
0.119e-548Triticum aestivumTa.946.1.S1_atBT009593.1--2e-5At4g35300TMT2 (TONOPLAST MONOSACCHARIDE TRANSPORTER2)C.G.S.X.
0.238e-30129Vitis vinifera1611615_atCF405714hypothetical protein LOC100264011-4e-17At4g35300TMT2 (TONOPLAST MONOSACCHARIDE TRANSPORTER2)C.G.S.X.
0.032e+032Zea maysZm.1776.1.S1_atBM382204--2e-11At1g27330-C.G.S.X.
Click here to hide the above table.


Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
Click here to hide the above table.


Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
Click here to hide the above table.



Back to the CoP portal site

Back to the KAGIANA project homepage