Gene omics information

Query gene ID	GmaAffx.43069.1.S1_at
Gene name
Organism	Glycine max

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.91	98.6	GmaAffx.43069.1.S1_at	AI494747	-	-	4e-7	At1g14570	UBX domain-containing protein	S.X.	H.G.	Please select
0.61	81.8	Gma.5720.2.S1_a_at	BG652626	-	-	2e-5	At1g51200	zinc finger (AN1-like) family protein	S.X.	H.G.	Please select
0.50	71.7	Gma.7528.2.S1_at	BM891312	-	-	3e-49	At4g16143	IMPA-2 (IMPORTIN ALPHA ISOFORM 2)	S.X.	H.G.	Please select
0.47	66.6	GmaAffx.68394.1.S1_at	BU082577	-	-	3e+0	At5g03660	unknown protein	S.X.	H.G.	Please select
0.38	53.3	GmaAffx.91748.1.S1_s_at	CF807473	-	-	1e-102	At2g01970	endomembrane protein 70, putative	S.X.	H.G.	Please select
0.33	46.1	GmaAffx.90621.1.S1_s_at	CF806346	-	-	4e-50	At2g21270	ubiquitin fusion degradation UFD1 family protein	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
3.2	96.0	GSM293247	34_C066.1P.R9P2P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
2.9	95.4	GSM294132	86_3112.2G.R9G1P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
2.6	94.5	GSM293390	74_1588.1Q.R230P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
2.5	94.2	GSM293414	96_1554.1Q.R120P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
2.5	94.2	GSM294714	77_2580.2M.R034P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
2.5	94.2	GSM293548	62_3010.2A.R9A2P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
2.4	93.8	GSM293586	18_2092.2B.R298P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
2.4	93.8	GSM293526	42_2022.2A.R275P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
2.4	93.8	GSM293275	5_C064.1P.V7P2P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
2.4	93.8	GSM292969	47_C222.1M.R9M1P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.01	1e-1	38	PsAffx.C39000093_at	PsAffx.C39000093	-	-	1e-3	At5g41620	-	C.G.	S.X.	Please select
0.01	5e-1	36	PsAffx.C99000010_at	PsAffx.C99000010	-	-	1e-3	At1g08340	rac GTPase activating protein, putative	C.G.	S.X.	Please select
0.02	5e-1	36	PsAffx.C74000056_at	PsAffx.C74000056	-	-	7e-4	At1g10420	-	C.G.	S.X.	Please select
0.03	2e+0	34	PsAffx.psZG006xO11f_s_at	PsAffx.psZG006xO11f	-	-	3e+0	At5g30341	unknown protein	C.G.	S.X.	Please select
0.02	2e+0	34	PsAffx.CL538Contig1_at	PsAffx.CL538Contig1	-	-	5e-1	At2g45530	zinc finger (C3HC4-type RING finger) family protein	C.G.	S.X.	Please select
0.01	2e+0	34	PsAffx.C355000003_at	PsAffx.C355000003	-	-	4e+0	At4g31460	ribosomal protein L28 family protein	C.G.	S.X.	Please select
0.02	2e+0	34	PsAffx.C244000009_at	PsAffx.C244000009	-	-	5e-1	At4g13500	unknown protein	C.G.	S.X.	Please select
0.01	2e+0	34	PsAffx.C1000309_at	PsAffx.C1000309	-	-	7e-3	At5g04890	RTM2 (RESTRICTED TEV MOVEMENT 2)	C.G.	S.X.	Please select
0.03	2e+0	34	HgAffx.19424.1.S1_at	CA939756	-	-	4e+0	At5g20510	AL5 (ALFIN-LIKE 5)	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.10	4e-7	56	Arabidopsis thaliana	At1g14570	838019	UBX domain-containing protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MPFOB	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.03	2e-1	36	Hordeum vulgare	HB20M17r_at	HB20M17r	-	-	6e-1	At4g36460	unknown protein	C.G.	S.X.	Please select
0.04	3e-6	54	Oryza sativa	Os04g0670800	AK073170.1	-	The start codon is not identified.	2e-4	At1g14570	UBX domain-containing protein	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.27	6e-13	75	Populus trichocarpa	PtpAffx.156448.1.S1_s_at	CK091713	hypothetical protein	-	6e-10	At1g14570	UBX domain-containing protein	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.04	7e-6	52	Triticum aestivum	Ta.6252.1.S1_x_at	CK211270	-	-	5e-5	At1g14570	UBX domain-containing protein	C.G.	S.X.	Please select
0.03	4e-1	34	Vitis vinifera	1615370_at	CF372878	hypothetical protein LOC100266022	-	6e-2	At4g08330	unknown protein	C.G.	S.X.	Please select
0.05	3e+0	32	Zea mays	Zm.7682.1.A1_at	BM079476	-	-	7e-1	At1g61340	F-box family protein	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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