Gene omics information

Query gene ID GmaAffx.42668.1.S1_at
Gene name
Organism Glycine max


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.9198.6GmaAffx.42668.1.S1_atBU761245--2e-8At3g16720ATL2S.X.H.G.
0.4057.1GmaAffx.35792.1.S1_s_atBQ252956--8e-1At4g22830unknown proteinS.X.H.G.
0.3142.2GmaAffx.35792.1.S1_x_atBQ252956--8e-1At4g22830unknown proteinS.X.H.G.
0.069.0PsAffx.psZG005xN22f_s_atPsAffx.psZG005xN22f--9e+0At5g14602unknown proteinS.X.H.G.
0.058.0PsAffx.C59000014_atPsAffx.C59000014--1e-1At5g53910(S)-2-hydroxy-acid oxidase, peroxisomal, putative / glycolate oxidase, putative / short chain alpha-hydroxy acid oxidase, putativeS.X.H.G.
0.001.4GmaAffx.90612.1.S1_atCF806337--2e-14At5g63470NF-YC4 (NUCLEAR FACTOR Y, SUBUNIT C4)S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
280.3100.0GSM29292395_1465.1L.R283L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
37.699.9GSM29426823_2428.2I.R297P, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
26.199.8GSM182035Laser capture microdissected (LCM) endosperm at the heart stage, biological replicate 1GSE7511Expression data from soybean seed compartments with embryos at the heart stage
19.599.7GSM147953Laser capture microdissected (LCM) inner integument at the globular stage, biological replicate 3GSE6414Expression data from soybean seed compartments with embryos at the globular stage
13.399.5GSM24480717_CON.M2W3.CEL, Experimental replicate 3GSE9687Expression patterns in time and space during P.sojae infection of soybean cultivars differing in quantitative resistance
12.199.5GSM29223335_C030.1B.R9B2P, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
11.899.4GSM29308281_C019.1N.R9N1U, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
11.099.4GSM201123Laser capture microdissected (LCM) seed coat hilum at the early maturation stage, biological replicate 2GSE8112Expression data from soybean seed compartments with embryos at the early maturation stage
10.999.4GSM29216318-1009.1A.R006L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
10.399.3GSM29364168_2065.2B.R129U, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.061e-963GmaAffx.50835.1.S1_s_atAW349835--1e-2At1g53820zinc finger (C3HC4-type RING finger) family proteinC.G.S.X.
0.051e-344GmaAffx.53152.1.S1_atBE823592--6e-7At3g16720ATL2C.G.S.X.
0.058e-238GmaAffx.83399.1.S1_atBU090513--1e-2At5g11070unknown proteinC.G.S.X.
0.048e-238GmaAffx.564.1.S1_atBE348138--2e-5At1g02070unknown proteinC.G.S.X.
0.043e-136HgAffx.21474.1.S1_atBI748279--8e-1At5g27440unknown proteinC.G.S.X.
0.033e-136GmaAffx.90300.1.S1_s_atCF806025PDR-like ABC-transporter-2e-2At1g15520PDR12 (PLEIOTROPIC DRUG RESISTANCE 12)C.G.S.X.
0.033e-136GmaAffx.90300.1.S1_atCF806025PDR-like ABC-transporter-2e-2At1g15520PDR12 (PLEIOTROPIC DRUG RESISTANCE 12)C.G.S.X.
0.043e-136GmaAffx.41046.1.S1_atBI094873--7e-2At2g24762AtGDU4 (Arabidopsis thaliana GLUTAMINE DUMPER 4)C.G.S.X.
0.033e-136Gma.7012.2.S1_atCD399028--7e-3At2g03420unknown proteinC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.072e-859Arabidopsis thalianaAt3g16720820924ATL2RING-H2 protein induced after exposure to chitin or inactivated crude cellulase preparations.---C.G.S.X.
0.053e-238Hordeum vulgareContig22849_atContig22849--1e-2At3g63230unknown proteinC.G.S.X.
0.034e-136Oryza sativaOsAffx.31604.1.S1_at---0C.G.S.X.
0.052e-550Populus trichocarpaPtpAffx.79516.1.S1_atAY780430.1--7e-16At3g16720ATL2C.G.S.X.
0.049e-134Triticum aestivumTaAffx.42918.1.S1_atBE429196--1e-2At1g63057unknown proteinC.G.S.X.
0.062e-238Vitis vinifera1622773_atCF605812hypothetical protein LOC100253381-2e-2At4g15975protein binding / zinc ion bindingC.G.S.X.
0.044e-134Zea maysZm.12616.1.S1_atBU050895--3e-7At1g10960ATFD1 (FERREDOXIN 1)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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