Gene omics information

Query gene ID	GmaAffx.40735.1.S1_at
Gene name	MYB transcription factor MYB130
Organism	Glycine max

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.91	98.6	GmaAffx.40735.1.S1_at	BG315862	MYB transcription factor MYB130	-	4e-7	At3g49850	TRB3 (TELOMERE REPEAT BINDING FACTOR 3)	S.X.	H.G.	Please select
0.55	76.3	Gma.1353.2.S1_at	BG041704	-	-	1e-47	At4g26100	CK1 (CASEIN KINASE 1)	S.X.	H.G.	Please select
0.53	74.2	Gma.4214.1.S1_at	CD418435	mitogen-activated protein kinase 2	-	5e-70	At2g43790	ATMPK6 (ARABIDOPSIS THALIANA MAP KINASE 6)	S.X.	H.G.	Please select
0.52	73.1	Gma.3839.1.S1_at	CD391787	-	-	2e-69	At1g60780	HAP13 (HAPLESS 13)	S.X.	H.G.	Please select
0.50	71.7	Gma.3291.2.S1_at	BM520616	-	-	6e-72	At4g18710	BIN2 (BRASSINOSTEROID-INSENSITIVE 2)	S.X.	H.G.	Please select
0.50	71.7	Gma.11094.2.S1_a_at	BU546011	-	-	1e-10	At2g14835	zinc finger (C3HC4-type RING finger) family protein	S.X.	H.G.	Please select
0.47	66.6	GmaAffx.43499.1.S1_at	CD407408	-	-	5e-3	At1g12470	Pep3/Vps18/deep orange family protein	S.X.	H.G.	Please select
0.47	66.6	Gma.1265.1.S1_a_at	BI946222	-	-	1e-10	At5g19860	unknown protein	S.X.	H.G.	Please select
0.46	65.5	Gma.8227.2.S1_a_at	BU549248	-	-	5e-28	At2g26590	adhesion regulating molecule family	S.X.	H.G.	Please select
0.46	65.5	Gma.16756.1.S1_x_at	BI967486	-	-	4e-66	At3g52560	UEV1D-4 (UBIQUITIN E2 VARIANT 1D-4)	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
6.9	98.8	GSM292923	95_1465.1L.R283L, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.5	96.6	GSM293613	42_2054.2B.R307P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.2	96.0	GSM293221	10_1541.1P.R051L, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.1	95.8	GSM292206	69-1017.1A.R010U, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
2.7	94.8	GSM244804	16_V71.M5W4.CEL, Experimental replicate 4	GSE9687	Expression patterns in time and space during P.sojae infection of soybean cultivars differing in quantitative resistance
2.5	94.2	GSM293491	10_3002.2A.SLA1P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
2.5	94.2	GSM293264	4_C058.1P.R9P1P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
2.4	93.8	GSM294268	23_2428.2I.R297P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
2.4	93.8	GSM244818	1_SLO.M2W2.CEL, Experimental replicate 2	GSE9687	Expression patterns in time and space during P.sojae infection of soybean cultivars differing in quantitative resistance
2.4	93.8	GSM293111	26_1134.1O.R084P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.50	2e-80	299	GmaAffx.84304.1.S1_at	BM271493	MYB transcription factor MYB85	-	1e+0	At5g03400	unknown protein	C.G.	S.X.	Please select
0.01	1e-1	38	PsAffx.C119000037_at	PsAffx.C119000037	-	-	3e-1	At2g01340	unknown protein	C.G.	S.X.	Please select
0.00	5e-1	36	PsAffx.C23000090_at	PsAffx.C23000090	-	-	6e-9	At5g13010	EMB3011 (embryo defective 3011)	C.G.	S.X.	Please select
0.00	5e-1	36	PsAffx.C160000016_at	PsAffx.C160000016	-	-	2e-15	At4g35800	NRPB1 (RNA POLYMERASE II LARGE SUBUNIT)	C.G.	S.X.	Please select
0.03	5e-1	36	GmaAffx.91592.1.S1_s_at	CF807317	-	-	3e-1	At4g37540	LBD39 (LOB DOMAIN-CONTAINING PROTEIN 39)	C.G.	S.X.	Please select
0.03	5e-1	36	GmaAffx.849.3.A1_at	BF424300	-	-	4e+0	At1g67700	unknown protein	C.G.	S.X.	Please select
0.03	5e-1	36	GmaAffx.849.3.S1_at	BE210622	-	-	4e+0	At1g67700	unknown protein	C.G.	S.X.	Please select
0.01	2e+0	34	PsAffx.C74000014_at	PsAffx.C74000014	-	-	4e+0	At4g12360	protease inhibitor/seed storage/lipid transfer protein (LTP) family protein	C.G.	S.X.	Please select
0.02	2e+0	34	PsAffx.C73000076_at	PsAffx.C73000076	-	-	3e+0	At4g03210	XTH9 (XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE 9)	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.21	4e-7	56	Arabidopsis thaliana	At3g49850	824147	TRB3 (TELOMERE REPEAT BINDING FACTOR 3)	Encodes a telomeric DNA binding protein. In vitro, the protein preferentially binds double-stranded telomeric repeats, but it can also bind to the single G-rich telomeric strand.	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.07	3e-12	71	Hordeum vulgare	Contig10358_at	Contig10358	-	-	8e-1	At5g67580	TRB2	C.G.	S.X.	Please select
0.10	5e-11	69	Oryza sativa	Os01g0589300	AK058846.1	-	Single myb histone 1	9e-4	At1g49950	DNA-binding protein, putative	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.26	2e-13	77	Populus trichocarpa	PtpAffx.207442.1.S1_at	pmrna14781	single myb histone	-	5e-10	At3g49850	TRB3 (TELOMERE REPEAT BINDING FACTOR 3)	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.03	2e+0	34	Triticum aestivum	TaAffx.112196.1.S1_at	CA626137	-	-	4e+0	At3g53232	RTFL1 (ROTUNDIFOLIA LIKE 1)	C.G.	S.X.	Please select
0.04	4e-1	34	Vitis vinifera	1614074_at	CB350096	hypothetical protein LOC100251591	-	1e+0	At4g36700	cupin family protein	C.G.	S.X.	Please select
0.06	4e-8	57	Zea mays	Zm.3940.1.S1_at	AY280630.1	single myb histone 5	-	3e-3	At1g49950	DNA-binding protein, putative	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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