Gene omics information

Query gene ID GmaAffx.38805.2.S1_at
Gene name
Organism Glycine max


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.7187.8GmaAffx.38805.2.S1_atAW099793--3e+0At5g44420PDF1.2S.X.H.G.
0.5576.3GmaAffx.62927.1.S1_atBI972284--2e-4At5g58430ATEXO70B1 (exocyst subunit EXO70 family protein B1)S.X.H.G.
0.3650.8GmaAffx.79145.1.S1_atCA853340--2e-3At5g65630GTE7 (Global transcription factor group E 7)S.X.H.G.
0.3040.4GmaAffx.92617.1.S1_s_atCF807608--2e-2At3g51370protein phosphatase 2C, putative / PP2C, putativeS.X.H.G.
0.2735.7GmaAffx.90713.1.S1_atCF806438--3e-1At2g38690unknown proteinS.X.H.G.
0.013.4GmaAffx.81793.1.S1_atBM188266--1e-1At1g07520scarecrow transcription factor family proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
7.598.9GSM29215810_C010.1A.R9A2P, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
7.398.9GSM29292395_1465.1L.R283L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
5.798.4GSM29330789_1202.1P.R124P, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
5.698.3GSM2921985_C008.1A.V7A2P, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
5.498.2GSM29241216_1250.1G.R155P, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
5.198.1GSM29229642_C076.1E.R9E1P, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.998.0GSM29248582_1258.1G.R164P, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.897.9GSM2936547_2070.2B.R213P, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.897.9GSM29248179_1257.1G.R164L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.897.9GSM29244849_C110.1G.V7G1P, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.023e-136PsAffx.CL516Contig1_atPsAffx.CL516Contig1--2e+0At3g04630WDL1C.G.S.X.
0.011e+034PsAffx.C195000017_atPsAffx.C195000017--2e+0At1g12451unknown proteinC.G.S.X.
0.041e+034HgAffx.18442.1.S1_atCB377743--9e-2At3g02820zinc knuckle (CCHC-type) family proteinC.G.S.X.
0.031e+034GmaAffx.87433.1.S1_atBI701509--2e-3At4g23496SP1L5 (SPIRAL1-LIKE5)C.G.S.X.
0.041e+034Gma.2377.1.S1_atBM143722--2e-1At4g2574040S ribosomal protein S10 (RPS10A)C.G.S.X.
0.041e+034Gma.14037.1.A1_atBU548988--3e-7At5g41770crooked neck protein, putative / cell cycle protein, putativeC.G.S.X.
0.034e+032PsAffx.C3000199_atPsAffx.C3000199--7e+0At3g26561unknown proteinC.G.S.X.
0.024e+032PsAffx.C152000033_atPsAffx.C152000033--7e-1At2g22090UBP1 interacting protein 1a (UBA1a)C.G.S.X.
0.014e+032PsAffx.C152000012_atPsAffx.C152000012--3e-1At2g20790protein bindingC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.053e+032Arabidopsis thalianaAt5g44420834469PDF1.2Encodes an ethylene- and jasmonate-responsive plant defensin. mRNA levels are not responsive to salicylic acid treatment; although jasmonate and salicylic acid can act synergistically to enhance the expression of this gene. Belongs to the plant defensin (PDF) family with the following members: At1g75830/PDF1.1, At5g44420/PDF1.2a, At2g26020/PDF1.2b, At5g44430/PDF1.2c, At2g26010/PDF1.3, At1g19610/PDF1.4, At1g55010/PDF1.5, At2g02120/PDF2.1, At2g02100/PDF2.2, At2g02130/PDF2.3, At1g61070/PDF2.4, At5g63660/PDF2.5, At2g02140/PDF2.6, At5g38330/PDF3.1 and At4g30070/PDF3.2.---C.G.S.X.
0.031e+032Hordeum vulgareHA10F18u_atHA10F18u--3e-1At4g24060Dof-type zinc finger domain-containing proteinC.G.S.X.
0.031e+034Oryza sativaOs.34341.2.S1_at---0C.G.S.X.
0.044e+032Populus trichocarpaPtpAffx.213298.1.S1_atpmrna26003hypothetical protein-6e-1At1g04520PDLP2 (PLASMODESMATA-LOCATED PROTEIN 2)C.G.S.X.
0.043e+032Triticum aestivumTaAffx.51582.1.S1_x_atCA723376--2e-1At5g53970aminotransferase, putativeC.G.S.X.
0.033e+030Vitis vinifera1617566_atCF213777hypothetical protein LOC100247823-1e+0At3g17310methyltransferase family proteinC.G.S.X.
0.043e-134Zea maysZmAffx.857.1.A1_atAI770690--3e+0At4g23496SP1L5 (SPIRAL1-LIKE5)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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