Gene omics information

Query gene ID	GmaAffx.3619.1.S1_at
Gene name
Organism	Glycine max

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.71	87.8	GmaAffx.3619.1.S1_at	BQ785103	-	-	5e-76	At1g75380	wound-responsive protein-related	S.X.	H.G.	Please select
0.33	46.1	Gma.16021.1.S1_at	BQ296209	-	-	9e-12	At1g20823	zinc finger (C3HC4-type RING finger) family protein	S.X.	H.G.	Please select
0.31	42.2	Gma.2022.1.S1_at	AI988045	-	-	2e-7	At5g43450	2-oxoglutarate-dependent dioxygenase, putative	S.X.	H.G.	Please select
0.21	26.6	GmaAffx.13983.1.S1_at	BU765669	-	-	8e-28	At3g32930	unknown protein	S.X.	H.G.	Please select
0.15	18.7	GmaAffx.17775.1.S1_at	CA820121	-	-	2e-15	At5g27280	zinc finger (DNL type) family protein	S.X.	H.G.	Please select
0.08	11.0	Gma.5061.1.S1_at	BQ298578	-	-	4e-51	At2g01110	APG2 (ALBINO AND PALE GREEN 2)	S.X.	H.G.	Please select
0.06	9.0	GmaAffx.57668.1.S1_at	BM567837	-	-	8e-3	At2g42610	LSH10 (LIGHT SENSITIVE HYPOCOTYLS 10)	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
92.9	100.0	GSM245934	Leaf_Water Control_Rep 2_48 h After Treatment	GSE9730	Effect of foliar spray of lipo-chitooligosaccharide (Nod factor) on soybean leaf gene expression.
73.6	100.0	GSM245933	Leaf_Water Control_Rep 1_48 h After Treatment	GSE9730	Effect of foliar spray of lipo-chitooligosaccharide (Nod factor) on soybean leaf gene expression.
72.0	100.0	GSM245936	Leaf_LCO treated_Rep 1_48 h After Treatment	GSE9730	Effect of foliar spray of lipo-chitooligosaccharide (Nod factor) on soybean leaf gene expression.
59.7	99.9	GSM209584	susceptible_6hours_rep2	GSE8432	Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhizi
51.7	99.9	GSM209593	susceptible_6hours_rep3	GSE8432	Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhizi
47.3	99.9	GSM209575	susceptible_6hours_rep1	GSE8432	Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhizi
44.2	99.9	GSM209592	resistant_6hours_rep3	GSE8432	Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhizi
43.0	99.9	GSM209574	resistant_6hours_rep1	GSE8432	Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhizi
39.2	99.9	GSM209583	resistant_6hours_rep2	GSE8432	Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhizi
35.9	99.9	GSM245937	Leaf_LCO treated_Rep 2_48 h After Treatment	GSE9730	Effect of foliar spray of lipo-chitooligosaccharide (Nod factor) on soybean leaf gene expression.

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.30	6e-135	482	GmaAffx.3619.2.S1_at	BE474562	-	-	2e-1	At1g75380	wound-responsive protein-related	C.G.	S.X.	Please select
0.08	4e-34	147	Gma.16488.1.S1_at	BU084208	-	-	3e-1	At1g63055	unknown protein	C.G.	S.X.	Please select
0.01	1e+0	36	PsAffx.CL1498Contig1_at	PsAffx.CL1498Contig1	-	-	7e+0	At5g16250	unknown protein	C.G.	S.X.	Please select
0.02	1e+0	36	GmaAffx.9520.1.A1_at	BI970995	-	-	4e+0	At4g15910	ATDI21 (ARABIDOPSIS THALIANA DROUGHT-INDUCED 21)	C.G.	S.X.	Please select
0.01	1e+0	36	GmaAffx.92829.1.S1_s_at	CF807177	-	-	2e-18	At1g80600	WIN1 (HOPW1-1-INTERACTING 1)	C.G.	S.X.	Please select
0.01	1e+0	36	Gma.2543.1.S1_at	AI960145	-	-	7e-20	At1g80600	WIN1 (HOPW1-1-INTERACTING 1)	C.G.	S.X.	Please select
0.00	4e+0	34	PsAffx.C30000096_at	PsAffx.C30000096	-	-	1e+0	At5g64905	PROPEP3 (Elicitor peptide 3 precursor)	C.G.	S.X.	Please select
0.01	4e+0	34	GmaAffx.93436.1.A1_s_at	CF809161	-	-	4e-13	At2g47520	AP2 domain-containing transcription factor, putative	C.G.	S.X.	Please select
0.01	4e+0	34	GmaAffx.46245.1.S1_at	AW099140	-	-	2e-13	At5g15710	F-box family protein	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.35	5e-76	286	Arabidopsis thaliana	At1g75380	843874	wound-responsive protein-related	F:unknown;P:unknown;C:unknown;BOPA	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.05	1e-13	77	Hordeum vulgare	rbah31f14_s_at	rbah31f14	-	-	1e+0	At1g75380	wound-responsive protein-related	C.G.	S.X.	Please select
0.13	7e-9	63	Oryza sativa	Os08g0357000	BQ905925	-	Conserved hypothetical protein	3e+1	At4g01340	CHP-rich zinc finger protein-related	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.29	7e-45	182	Populus trichocarpa	PtpAffx.10771.1.S1_a_at	CV283492	hypothetical protein	-	9e-50	At1g75380	wound-responsive protein-related	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.05	8e-1	36	Triticum aestivum	Ta.26655.1.S1_at	CD491484	-	-	4e-1	Atmg00740	-	C.G.	S.X.	Please select
0.28	1e-83	309	Vitis vinifera	1621693_at	BQ792185	hypothetical protein LOC100248963	-	5e-73	At1g75380	wound-responsive protein-related	C.G.	S.X.	Please select
0.11	2e-5	50	Zea mays	Zm.3656.1.A1_at	AY106382.1	Wound responsive protein-like	-	2e-1	At1g75380	wound-responsive protein-related	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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