CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID GmaAffx.31477.1.A1_at

Gene name

Organism Glycine max

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.73 88.9 GmaAffx.31477.1.A1_at CA784780 - - 7e-57 At4g30020 subtilase family protein S.X. H.G.
0.50 71.7 Gma.1155.1.S1_at BE805343 - - 6e-6 At1g13750 calcineurin-like phosphoesterase family protein S.X. H.G.
0.44 63.3 Gma.17909.1.S1_at BU546339 - - 1e-1 At4g04900 RIC10 (ROP-INTERACTIVE CRIB MOTIF-CONTAINING PROTEIN 10) S.X. H.G.
0.40 57.1 GmaAffx.80511.1.S1_at AW755736 - - 1e+0 At1g13760 unknown protein S.X. H.G.
0.40 57.1 GmaAffx.59330.1.S1_at BG882585 - - 7e-20 At5g66600 unknown protein S.X. H.G.
0.36 50.8 Gma.15570.1.S1_s_at BQ627549 - - 1e-10 At1g13750 calcineurin-like phosphoesterase family protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
7.4 98.9 GSM293586 18_2092.2B.R298P, Experimental replicate 2 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
5.9 98.5 GSM293601 31_2069.2B.R213L, Experimental replicate 2 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
5.3 98.2 GSM293307 89_1202.1P.R124P, Experimental replicate 1 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
5.0 98.0 GSM293491 10_3002.2A.SLA1P, Experimental replicate 2 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.7 97.8 GSM293333 22_1549.1Q.R078L, Experimental replicate 1 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.3 97.5 GSM293292 75_1530.1P.R005P, Experimental replicate 1 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.2 97.4 GSM244835 23_V71.M2W1.CEL, Experimental replicate 1 GSE9687 Expression patterns in time and space during P.sojae infection of soybean cultivars differing in quantitative resistance
3.9 97.1 GSM244876 32_SLO.M2W1.CEL, Experimental replicate 1 GSE9687 Expression patterns in time and space during P.sojae infection of soybean cultivars differing in quantitative resistance
3.9 97.1 GSM293594 25_2056.2B.R020P, Experimental replicate 2 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.9 97.1 GSM293310 91_1180.1P.R110P, Experimental replicate 1 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
1.00 0 934 GmaAffx.31477.1.S1_at BF597831 - - 7e-57 At4g30020 subtilase family protein C.G. S.X.
0.29 7e-67 254 Gma.7222.2.S1_at AW759469 - - 8e-18 At4g30020 subtilase family protein C.G. S.X.
0.23 4e-25 115 GmaAffx.67596.1.S1_at BF009589 - - 2e-26 At2g19170 SLP3 C.G. S.X.
0.01 8e-2 38 PsAffx.C74000025_s_at PsAffx.C74000025 - - 1e+1 At5g60230 SEN2 (splicing endonuclease 2) C.G. S.X.
0.01 8e-2 38 PsAffx.C1000060_at PsAffx.C1000060 - - 3e-1 At1g71697 ATCK1 (CHOLINE KINASE 1) C.G. S.X.
0.01 8e-2 38 Gma.350.1.S1_at D10717.1 phosphoenolpyruvate carboxylase - 7e-117 At1g53310 ATPPC1 (PHOSPHOENOLPYRUVATE CARBOXYLASE 1) C.G. S.X.
0.01 1e+0 34 PsAffx.C94000044_at PsAffx.C94000044 - - 8e-1 At4g29020 glycine-rich protein C.G. S.X.
0.01 1e+0 34 PsAffx.C70000011_at PsAffx.C70000011 - - 1e-2 At5g06380 unknown protein C.G. S.X.
0.01 1e+0 34 PsAffx.C201000019_at PsAffx.C201000019 - - 2e-1 At4g14710 acireductone dioxygenase [iron(II)-requiring]/ metal ion binding C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.25 7e-57 220 Arabidopsis thaliana At4g30020 829125 subtilase family protein F:identical protein binding, serine-type endopeptidase activity;P:proteolysis, negative regulation of catalytic activity;C:endomembrane system, cell wall, membrane;BPOFAM - - - C.G. S.X.
0.04 7e+0 30 Hordeum vulgare HV_CEb0011H17r2_at HV_CEb0011H17r2 - - 4e+0 At5g20165 unknown protein C.G. S.X.
0.14 2e-28 127 Oryza sativa Os06g0700000 AK102835.1 - Proteinase inhibitor I9, subtilisin propeptidedomain containing protein 1e-53 At2g19170 SLP3 C.G. S.X.
0.67 8e-73 274 Populus trichocarpa PtpAffx.60298.1.S1_s_at CK106266 hypothetical protein - 2e-54 At2g19170 SLP3 C.G. S.X.
0.04 2e-5 50 Triticum aestivum Ta.29457.1.S1_at CK205969 - - 1e-18 At4g30020 subtilase family protein C.G. S.X.
0.04 1e+0 32 Vitis vinifera 1622228_at CF568837 - - 4e-68 At1g52740 HTA9 (HISTONE H2A PROTEIN 9) C.G. S.X.
0.04 2e+0 32 Zea mays Zm.5789.13.A1_a_at AI670670 hypothetical protein LOC100192516 - 8e-7 At1g43170 ARP1 (ARABIDOPSIS RIBOSOMAL PROTEIN 1) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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