Gene omics information

Query gene ID GmaAffx.30877.1.S1_at
Gene name
Organism Glycine max


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.9298.9GmaAffx.30877.1.S1_atBE822745--1e+0At1g59640ZCW32S.X.H.G.
0.5778.8Gma.17717.2.S1_a_atAI973919--4e-21At5g20090unknown proteinS.X.H.G.
0.1518.7Gma.16576.1.S1_atBI967831--2e-59At1g78300GRF2 (GENERAL REGULATORY FACTOR 2)S.X.H.G.
0.1518.7Gma.16576.1.S1_x_atBI967831--2e-59At1g78300GRF2 (GENERAL REGULATORY FACTOR 2)S.X.H.G.
0.1114.2Gma.14269.1.S1_atCD404579--2e-18At3g57785unknown proteinS.X.H.G.
0.0912.0Gma.6435.1.S1_atAW597831--3e-14At5g42570-S.X.H.G.
0.035.8GmaAffx.83815.1.S1_s_atBG404904--1e+0At1g04330unknown proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
49.599.9GSM29292395_1465.1L.R283L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
5.198.1GSM29238660_1231.1F.R142U, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.998.0GSM29307777_1077.1N.R046L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.197.3GSM29291285_1467.1L.R284L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.097.2GSM2931485_1147.1O.R093U, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.997.1GSM24485628_V71.I1W2.CEL, Experimental replicate 2GSE9687Expression patterns in time and space during P.sojae infection of soybean cultivars differing in quantitative resistance
3.897.0GSM29247674_1281.1G.R179L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.897.0GSM209596resistant_24hours_rep3GSE8432Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhizi
3.796.8GSM236910Soybean_nonapicalmeristemGSE10607Genome-wide analysis of gene expression in the soybean shoot apical meristem
3.796.8GSM2936547_2070.2B.R213P, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.035e-136PsAffx.psMA015xN17f_atPsAffx.psMA015xN17f--5e+0At5g19930integral membrane family proteinC.G.S.X.
0.035e-136PsAffx.psMA015xN17f_s_atPsAffx.psMA015xN17f--5e+0At5g19930integral membrane family proteinC.G.S.X.
0.025e-136PsAffx.CL765Contig1_atPsAffx.CL765Contig1--2e+0At5g66870ASL1C.G.S.X.
0.015e-136PsAffx.C38000090_atPsAffx.C38000090--8e-2At1g08340rac GTPase activating protein, putativeC.G.S.X.
0.005e-136PsAffx.C234000006_atPsAffx.C234000006--3e-1At4g11960PGRL1B (PGR5-Like B)C.G.S.X.
0.025e-136PsAffx.C130000007_atPsAffx.C130000007--2e-1At2g35910zinc finger (C3HC4-type RING finger) family proteinC.G.S.X.
0.035e-136GmaAffx.54853.1.S1_atBI470148--8e-1At4g271402S seed storage protein 1 / 2S albumin storage protein / NWMU1-2S albumin 1C.G.S.X.
0.015e-136Gma.1862.1.S1_atJ03211.1lipoxygenase-2-1e-4At1g55020LOX1C.G.S.X.
0.012e+034PsAffx.C7000072_atPsAffx.C7000072--2e-2At1g69210unknown proteinC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.021e+034Arabidopsis thalianaAt1g59640842254ZCW32A basic helix-loop-helix encoding gene (BIGPETAL, BPE) involved in the control of petal size. BPE is expressed via two mRNAs derived from an alternative splicing event. The BPEub (AT1G59640.1)transcript is expressed ubiquitously, whereas the BPEp (AT1G59640.2) transcript is preferentially expressed in petals. Plants that lack the petal-expressed variant BPEp have larger petals as a result of increased cell size. BPEp is positively regulated downstream of APETALA3, PISTILLATA, APETALA1 and PISTILLATA3 and is negatively regulated downstream of AGAMOUS.---C.G.S.X.
0.047e-134Hordeum vulgarebaak1e23_atbaak1e23--4e+0At4g29103unknown proteinC.G.S.X.
0.037e-136Oryza sativaOs.51550.1.S1_at---0C.G.S.X.
0.038e+032Populus trichocarpaPtpAffx.3515.1.A1_atDN487491--3e+0At3g53220thioredoxin family proteinC.G.S.X.
0.044e-136Triticum aestivumTa.29563.1.S1_atCA729856--9e-1At1g68280thioesterase-relatedC.G.S.X.
0.047e-340Vitis vinifera1621405_atCF5179173-deoxy-D-arabino-heptulosonate 7-phosphate synthase-3e-4At1g224102-dehydro-3-deoxyphosphoheptonate aldolase, putative / 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase, putative / DAHP synthetase, putativeC.G.S.X.
0.046e-134Zea maysZmAffx.143.1.S1_atAI667791--5e+0At5g23480DNA bindingC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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