Gene omics information

Query gene ID	GmaAffx.30698.1.S1_at
Gene name
Organism	Glycine max

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.91	98.6	GmaAffx.30698.1.S1_at	BE555205	-	-	2e-3	At5g15780	pollen Ole e 1 allergen and extensin family protein	S.X.	H.G.	Please select
0.44	63.3	GmaAffx.8081.2.S1_at	AW755326	-	-	6e-1	At5g51812	unknown protein	S.X.	H.G.	Please select
0.11	14.2	GmaAffx.68657.1.S1_at	BE347158	-	-	1e+1	At5g22210	unknown protein	S.X.	H.G.	Please select
0.05	8.0	Gma.15925.1.S1_at	BG237519	-	-	7e-5	At4g25780	pathogenesis-related protein, putative	S.X.	H.G.	Please select
0.03	5.8	GmaAffx.45036.1.S1_at	BF595470	-	-	3e+0	At5g26848	unknown protein	S.X.	H.G.	Please select
0.00	1.4	GmaAffx.34785.11.S1_x_at	BG042061	-	-	6e-3	At1g21310	ATEXT3 (EXTENSIN 3)	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
114.3	100.0	GSM201120	Laser capture microdissected (LCM) seed coat hourglass at the early maturation stage, biological replicate 1	GSE8112	Expression data from soybean seed compartments with embryos at the early maturation stage
78.5	100.0	GSM292908	81_1454.1L.R277P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
54.1	99.9	GSM292904	78_1453.1L.R277U, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
51.4	99.9	GSM292911	84_1446.1L.R272P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
50.0	99.9	GSM292918	90_1489.1L.R295U, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
44.0	99.9	GSM292923	95_1465.1L.R283L, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
34.9	99.9	GSM292916	89_C203.1L.SLL1U, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
34.6	99.9	GSM292921	93_1448.1L.R273P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
32.2	99.9	GSM292903	77_C199.1L.V7L1L, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
30.3	99.8	GSM292900	74_1488.1L.R294P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.01	2e-1	36	PsAffx.C221000021_at	PsAffx.C221000021	-	-	5e+0	At2g36410	unknown protein	C.G.	S.X.	Please select
0.04	3e+0	32	GmaAffx.39477.1.S1_at	BE659886	-	-	4e-1	At5g45880	pollen Ole e 1 allergen and extensin family protein	C.G.	S.X.	Please select
0.02	3e+0	32	GmaAffx.27596.1.S1_at	BU545987	-	-	5e-5	At4g27300	S-locus protein kinase, putative	C.G.	S.X.	Please select
0.02	3e+0	32	Gma.4258.1.S1_at	BU548485	-	-	1e-21	At5g43600	UAH (UREIDOGLYCOLATE AMIDOHYDROLASE)	C.G.	S.X.	Please select
0.01	1e+1	30	PsAffx.C85000075_at	PsAffx.C85000075	-	-	1e+0	At1g63160	replication factor C 40 kDa, putative	C.G.	S.X.	Please select
0.02	1e+1	30	PsAffx.C6000138_at	PsAffx.C6000138	-	-	2e+0	At2g22770	NAI1	C.G.	S.X.	Please select
0.01	1e+1	30	PsAffx.C44000024_at	PsAffx.C44000024	-	-	3e-2	At5g08290	YLS8	C.G.	S.X.	Please select
0.00	1e+1	30	PsAffx.C165000027_s_at	PsAffx.C165000027	-	-	9e-1	At5g43750	unknown protein	C.G.	S.X.	Please select
0.00	1e+1	30	PsAffx.C165000027_at	PsAffx.C165000027	-	-	9e-1	At5g43750	unknown protein	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.08	2e-3	42	Arabidopsis thaliana	At5g15780	831434	pollen Ole e 1 allergen and extensin family protein	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;MBPOFVA	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.05	1e+1	28	Hordeum vulgare	Contig16925_at	Contig16925	-	-	2e-1	At1g49790	F-box family protein-related	C.G.	S.X.	Please select
0.03	2e-2	40	Oryza sativa	Os09g0508200	AK064705.1	-	-	1e-4	At5g41050	unknown protein	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.09	3e-6	52	Populus trichocarpa	PtpAffx.216905.1.S1_x_at	pmrna31968	-	-	3e-12	At5g15780	pollen Ole e 1 allergen and extensin family protein	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.05	2e+0	32	Triticum aestivum	Ta.7299.2.S1_a_at	CA605243	-	-	5e-12	At2g44100	ATGDI1 (ARABIDOPSIS THALIANA GUANOSINE NUCLEOTIDE DIPHOSPHATE DISSOCIATION INHIBITOR 1)	C.G.	S.X.	Please select
0.04	6e-1	32	Vitis vinifera	1611888_s_at	CF405685	-	-	4e+0	At5g16160	unknown protein	C.G.	S.X.	Please select
0.04	3e+0	30	Zea mays	Zm.1125.2.S1_at	CF036557	-	-	4e+0	At5g51860	MADS-box protein (AGL72)	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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