Gene omics information

Query gene ID GmaAffx.26533.1.A1_s_at
Gene name
Organism Glycine max


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.9499.2GmaAffx.26533.1.A1_s_atBE659836--7e-1At2g24260basic helix-loop-helix (bHLH) family proteinS.X.H.G.
0.6080.7Gma.4462.1.S1_atBI942329--6e-1At1g04340lesion inducing protein-relatedS.X.H.G.
0.3853.3Gma.5386.1.A1_atBM093925--4e+0At5g22370QQT1 (QUATRE-QUART 1)S.X.H.G.
0.3346.1Gma.12677.1.S1_atCD394516--1e+0At5g06060tropinone reductase, putative / tropine dehydrogenase, putativeS.X.H.G.
0.3142.2GmaAffx.27086.1.S1_atBG157259--7e-2At1g22370AtUGT85A5 (UDP-glucosyl transferase 85A5)S.X.H.G.
0.2839.0GmaAffx.6567.1.S1_atCD403256--6e-18At4g27560glycosyltransferase family proteinS.X.H.G.
0.2532.6Gma.3291.1.S1_atAF248055.1proline-rich protein-7e-3At1g12090ELP (EXTENSIN-LIKE PROTEIN)S.X.H.G.
0.2430.9Gma.2450.1.A1_atBI970853--5e+0At5g15530BCCP2 (BIOTIN CARBOXYL CARRIER PROTEIN 2)S.X.H.G.
0.2228.1Gma.10867.3.A1_atCD400510--7e+0At5g46115unknown proteinS.X.H.G.
0.2228.1GmaAffx.3255.1.S1_atCD411463--7e-5At5g33370GDSL-motif lipase/hydrolase family proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
292.7100.0GSM147936Laser capture microdissected (LCM) suspensor at the globular stage, biological replicate 1GSE6414Expression data from soybean seed compartments with embryos at the globular stage
291.9100.0GSM182048Whole Seed at the heart stage, biological replicate 2GSE7511Expression data from soybean seed compartments with embryos at the heart stage
235.9100.0GSM184829Whole Seed at the globular stage, biological replicate 2GSE6414Expression data from soybean seed compartments with embryos at the globular stage
223.2100.0GSM182047Whole Seed at the heart stage, biological replicate 1GSE7511Expression data from soybean seed compartments with embryos at the heart stage
221.9100.0GSM184826Young trifoliate leaf, biological replicate 1GSE6414Expression data from soybean seed compartments with embryos at the globular stage
194.4100.0GSM184828Whole Seed at the globular stage, biological replicate 1GSE6414Expression data from soybean seed compartments with embryos at the globular stage
132.1100.0GSM191091Soybean_Cotyledon_SEED1GSE7881Expression data from soybean seed compartments with embryos at the cotyledon stage
118.6100.0GSM191092Soybean_Cotyledon_SEED2GSE7881Expression data from soybean seed compartments with embryos at the cotyledon stage
100.5100.0GSM184827Young trifoliate leaf, biological replicate 2GSE6414Expression data from soybean seed compartments with embryos at the globular stage
54.399.9GSM238061Soybean-S03W4-5-RMAGSE9374Exploration of microarrays as tools to assess substantial equivalence of genetically modified soybeans
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.364e-154543Gma.4462.1.S1_atBI942329--6e-1At1g04340lesion inducing protein-relatedC.G.S.X.
0.064e-652GmaAffx.66466.1.S1_atBM307970--3e-1At1g16000unknown proteinC.G.S.X.
0.062e-550GmaAffx.28214.3.S1_atAW164194--3e+0At5g04850VPS60.2C.G.S.X.
0.077e-548GmaAffx.31017.1.A1_atBE658375--3e+0At2g26970exonuclease family proteinC.G.S.X.
0.077e-548GmaAffx.1620.3.S1_s_atAW132226--6e-1At5g26594ARR24 (Arabidopsis response regulator 24)C.G.S.X.
0.047e-548Gma.8337.1.S1_a_atAW705808--1e+0At4g26780AR192C.G.S.X.
0.067e-548Gma.16974.1.S1_atBE821194--4e+0At5g59440ZEU1 (ZEUS1)C.G.S.X.
0.053e-446GmaAffx.1301.86.S1_atBE057826--4e+0At5g12870MYB46 (MYB DOMAIN PROTEIN 46)C.G.S.X.
0.043e-446Gma.1373.2.A1_s_atBI968510--6e-25At2g26770plectin-relatedC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.027e-134Arabidopsis thalianaAt2g24260816961basic helix-loop-helix (bHLH) family proteinF:transcription factor activity, DNA binding;P:regulation of transcription;C:nucleus;PMFO---C.G.S.X.
0.074e-444Hordeum vulgarerbaal13n12_s_atrbaal13n12--8e+0At4g13615four F5 protein-related / 4F5 protein-relatedC.G.S.X.
0.046e-652Oryza sativaOs05g0228000AK064229.1-Purine and other phosphorylases, family 1 protein1e-2At4g28940catalyticC.G.S.X.
0.052e-240Populus trichocarpaPtp.4052.2.A1_atCV258257--4e-4At3g12500ATHCHIB (ARABIDOPSIS THALIANA BASIC CHITINASE)C.G.S.X.
0.061e-550Triticum aestivumTaAffx.52581.1.S1_atCA693335Dof1-9e-1At1g47655Dof-type zinc finger domain-containing proteinC.G.S.X.
0.102e-444Vitis vinifera1618086_atCB970077hypothetical protein LOC100242385-1e+0At5g63220unknown proteinC.G.S.X.
0.055e-340Zea maysZm.9008.2.S1_atAI665626--3e+0At3g27080TOM20-3 (TRANSLOCASE OF OUTER MEMBRANE 20 KDA SUBUNIT 3)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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