Gene omics information

Query gene ID	GmaAffx.24396.1.A1_at
Gene name
Organism	Glycine max

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.50	71.7	GmaAffx.24396.1.A1_at	BU547464	-	-	1e-16	At3g55260	HEXO1 (BETA-HEXOSAMINIDASE 1)	S.X.	H.G.	Please select
0.55	76.3	Gma.1278.1.S1_a_at	BE020433	-	-	4e-20	At1g03900	ATNAP4 (Arabidopsis thaliana non-intrinsic ABC protein 4)	S.X.	H.G.	Please select
0.55	76.3	Gma.5244.3.S1_a_at	BM893397	-	-	1e-32	At2g32080	PUR ALPHA-1	S.X.	H.G.	Please select
0.46	65.5	GmaAffx.93393.1.S1_s_at	CF808604	ascorbate peroxidase 1, cytosolic /// L-ascorbate peroxidase 2	-	6e-22	At1g07890	APX1 (ascorbate peroxidase 1)	S.X.	H.G.	Please select
0.29	39.0	Gma.17145.2.S1_at	CD396752	-	-	0	At2g18450	SDH1-2	S.X.	H.G.	Please select
0.29	39.0	GmaAffx.59019.1.S1_at	AW133348	-	-	1e-136	Atmg00160	-	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
4.3	97.5	GSM293601	31_2069.2B.R213L, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.0	97.2	GSM293300	82_C059.1P.SLP1U, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.7	96.8	GSM293332	21_1565.1Q.R153L, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.6	96.7	GSM293670	9_3035.2B.SLB3U, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.2	96.0	GSM293558	71_3013.2A.SLA3U, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.2	96.0	GSM293496	15_3013.2A.SLA3L, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.1	95.8	GSM293151	62_C049.1O.SLO3U, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.0	95.6	GSM293539	54_3007.2A.SLA2U, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.0	95.6	GSM293545	5_3015.2A.V7A3L, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
2.9	95.4	GSM293319	9_C059.1P.SLP1L, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.56	1e-143	510	Gma.2681.1.S1_s_at	CA853601	-	-	3e+0	At3g51370	protein phosphatase 2C, putative / PP2C, putative	C.G.	S.X.	Please select
0.39	9e-52	204	Gma.14699.1.A1_at	CD401069	-	-	2e-1	At3g18035	HON4	C.G.	S.X.	Please select
0.01	7e-3	42	PsAffx.C34000043_at	PsAffx.C34000043	-	-	7e-2	At5g18310	unknown protein	C.G.	S.X.	Please select
0.03	3e-2	40	PsAffx.CL994Contig1_at	PsAffx.CL994Contig1	-	-	5e+0	At5g10050	short-chain dehydrogenase/reductase (SDR) family protein	C.G.	S.X.	Please select
0.01	1e-1	38	PsAffx.C221000016_at	PsAffx.C221000016	-	-	5e+0	At3g58990	aconitase C-terminal domain-containing protein	C.G.	S.X.	Please select
0.02	1e-1	38	PsAffx.C15000008_at	PsAffx.C15000008	-	-	2e-1	At4g00810	60S acidic ribosomal protein P1 (RPP1B)	C.G.	S.X.	Please select
0.04	5e-1	36	PsAffx.psMA007xD12f_s_at	PsAffx.psMA007xD12f	-	-	7e-1	At5g64350	FKBP12 (FK506-BINDING PROTEIN)	C.G.	S.X.	Please select
0.01	5e-1	36	PsAffx.C63000025_at	PsAffx.C63000025	-	-	4e+0	At5g64350	FKBP12 (FK506-BINDING PROTEIN)	C.G.	S.X.	Please select
0.01	5e-1	36	PsAffx.C213000010_at	PsAffx.C213000010	-	-	1e+0	At4g31150	endonuclease V family protein	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.16	1e-16	87	Arabidopsis thaliana	At3g55260	824692	HEXO1 (BETA-HEXOSAMINIDASE 1)	Encodes a protein with β-hexosaminidase activity (the enzyme is active with p-nitrophenyl-β-N-acetylglucosaminide as substrate but displayed only a minor activity toward p-nitrophenyl-β-N-acetylgalactosaminide). The enzyme displays no distinct preference for a specific terminal GlcNAc residue and indeed cleaved the asialoagalactodabsylglycopeptide GnGn to a mixture of products.	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.14	5e-14	77	Hordeum vulgare	Contig8278_at	Contig8278	-	-	1e-3	At3g55260	HEXO1 (BETA-HEXOSAMINIDASE 1)	C.G.	S.X.	Please select
0.09	5e-17	89	Oryza sativa	Os05g0115900	BX898274	-	Beta-N-acetylhexosaminidase-like protein	2e+0	At1g08470	strictosidine synthase family protein	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.30	6e-28	125	Populus trichocarpa	PtpAffx.13128.1.S1_at	CV256441	hypothetical protein	-	6e-67	At3g55260	HEXO1 (BETA-HEXOSAMINIDASE 1)	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.19	2e-5	50	Triticum aestivum	Ta.16341.1.S1_s_at	BQ237896	-	-	4e-2	At3g55260	HEXO1 (BETA-HEXOSAMINIDASE 1)	C.G.	S.X.	Please select
0.23	2e-49	194	Vitis vinifera	1620064_at	CF211420	hypothetical protein LOC100251825	-	3e-58	At3g55260	HEXO1 (BETA-HEXOSAMINIDASE 1)	C.G.	S.X.	Please select
0.12	4e-2	38	Zea mays	Zm.1436.1.S1_at	CB617096	beta-hexosaminidase beta chain	-	5e-2	At3g55260	HEXO1 (BETA-HEXOSAMINIDASE 1)	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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