CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID GmaAffx.2179.1.S1_at

Gene name

Organism Glycine max

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.82 91.9 GmaAffx.2179.1.S1_at CD407818 - - 6e-22 At4g22990 SPX (SYG1/Pho81/XPR1) domain-containing protein S.X. H.G.
0.61 81.8 GmaAffx.86242.1.S1_s_at AW100091 - - 1e-1 At5g19260 unknown protein S.X. H.G.
0.58 78.8 Gma.17436.1.S1_at CD397773 - - 4e-23 At4g36450 ATMPK14 (Mitogen-activated protein kinase 14) S.X. H.G.
0.55 76.3 GmaAffx.59378.1.S1_at BI425133 - - 1e+0 At1g80100 AHP6 (ARABIDOPSIS HISTIDINE PHOSPHOTRANSFER PROTEIN 6) S.X. H.G.
0.53 74.2 Gma.6207.1.S1_s_at CF922738 - - 7e-16 At4g19640 ARA7 S.X. H.G.
0.51 72.3 Gma.7674.1.A1_at BQ785403 - - 3e-36 At2g20130 LCV1 (LIKE COV 1) S.X. H.G.
0.50 71.7 Gma.3083.1.S1_at BE474466 - - 3e-65 At4g33430 BAK1 (BRI1-ASSOCIATED RECEPTOR KINASE) S.X. H.G.
0.48 67.7 Gma.6542.1.S1_at BE821609 - - 3e-20 At2g01690 binding S.X. H.G.
0.46 65.5 GmaAffx.71281.1.S1_at BM523190 - - 2e+0 At4g13720 inosine triphosphate pyrophosphatase, putative / HAM1 family protein S.X. H.G.
0.45 63.9 Gma.8141.1.A1_at AW310817 - - 3e-11 At5g64500 membrane protein-related S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
5.6 98.3 GSM209591 mock_0hours_rep3 GSE8432 Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhizi
4.6 97.7 GSM209587 resistant_24hours_rep2 GSE8432 Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhizi
3.7 96.8 GSM209596 resistant_24hours_rep3 GSE8432 Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhizi
3.5 96.6 GSM293745 78_3049.2C.SLC3L, Experimental replicate 2 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.3 96.2 GSM209595 susceptible_12hours_rep3 GSE8432 Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhizi
3.2 96.0 GSM209594 resistant_12hours_rep3 GSE8432 Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhizi
3.1 95.8 GSM209585 resistant_12hours_rep2 GSE8432 Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhizi
3.1 95.8 GSM171608 12_Y.E.I.3, Experimental replicate Y GSE7124 Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistance
3.0 95.6 GSM209589 resistant_48hours_rep2 GSE8432 Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhizi
3.0 95.6 GSM209588 susceptible_24hours_rep2 GSE8432 Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhizi
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.06 2e-13 77 Gma.2508.2.S1_a_at CA938558 - - 9e-1 At2g26210 ankyrin repeat family protein C.G. S.X.
0.02 3e+0 34 PsAffx.C14000111_at PsAffx.C14000111 - - 4e+0 At5g48810 CB5-D (CYTOCHROME B5 ISOFORM D) C.G. S.X.
0.02 3e+0 34 GmaAffx.65140.2.S1_at AW233986 - - 1e+0 At3g01050 MUB1 (MEMBRANE-ANCHORED UBIQUITIN-FOLD PROTEIN 1 PRECURSOR) C.G. S.X.
0.02 3e+0 34 GmaAffx.35287.1.S1_at BE347867 - - 9e-1 At1g08710 F-box family protein C.G. S.X.
0.02 3e+0 34 GmaAffx.34651.1.S1_at AW350695 - - 4e+0 At5g07690 ATMYB29 (ARABIDOPSIS THALIANA MYB DOMAIN PROTEIN 29) C.G. S.X.
0.03 3e+0 34 GmaAffx.33533.1.S1_at BU761432 - - 2e-1 At5g67210 unknown protein C.G. S.X.
0.02 3e+0 34 Gma.7085.1.S1_at BE820335 - - 7e-13 At3g18000 XPL1 (XIPOTL 1) C.G. S.X.
0.01 3e+0 34 Gma.3820.1.S1_a_at AW156783 - - 9e-34 At1g30230 elongation factor 1-beta / EF-1-beta C.G. S.X.
0.01 3e+0 34 Gma.3820.1.S1_at AW156783 - - 9e-34 At1g30230 elongation factor 1-beta / EF-1-beta C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.14 6e-22 105 Arabidopsis thaliana At4g22990 828398 SPX (SYG1/Pho81/XPR1) domain-containing protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;BFOPMA - - - C.G. S.X.
0.10 2e-4 46 Hordeum vulgare Contig13913_at Contig13913 - - 4e-4 At4g22990 SPX (SYG1/Pho81/XPR1) domain-containing protein C.G. S.X.
0.10 6e-5 50 Oryza sativa Os02g0678200 9630.m04414 - SPX, N-terminal domain containing protein 3e-16 At1g63010 SPX (SYG1/Pho81/XPR1) domain-containing protein C.G. S.X.
0.35 2e-47 190 Populus trichocarpa PtpAffx.1027.1.A1_a_at CV254661 hypothetical protein - 6e-16 At1g63010 SPX (SYG1/Pho81/XPR1) domain-containing protein C.G. S.X.
0.03 2e+0 34 Triticum aestivum TaAffx.85709.1.S1_x_at CA620282 - - 7e-11 At5g25880 ATNADP-ME3 (NADP-malic enzyme 3) C.G. S.X.
0.29 2e-77 287 Vitis vinifera 1608688_s_at CF211998 hypothetical protein LOC100261500 - 7e-29 At4g22990 SPX (SYG1/Pho81/XPR1) domain-containing protein C.G. S.X.
0.10 3e-6 52 Zea mays Zm.17984.1.A1_at CK827091 - - 4e-4 At4g11810 SPX (SYG1/Pho81/XPR1) domain-containing protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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