Gene omics information

Query gene ID GmaAffx.1910.1.S1_at
Gene name
Organism Glycine max


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.6382.9GmaAffx.1910.1.S1_atBU761686--2e-1At5g25980TGG2 (GLUCOSIDE GLUCOHYDROLASE 2)S.X.H.G.
0.6786.1PsAffx.psHB004xH08f_atPsAffx.psHB004xH08f--5e+0At3g61840unknown proteinS.X.H.G.
0.5979.5GmaAffx.14602.1.S1_atBM731566--2e-1At3g45851unknown proteinS.X.H.G.
0.5778.8GmaAffx.15790.1.A1_atCD405768--2e+0At1g70790C2 domain-containing proteinS.X.H.G.
0.5374.2HgAffx.19033.4.A1_x_atCK350593--6e-2At1g54410dehydrin family proteinS.X.H.G.
0.5071.7GmaAffx.14280.1.S1_atBM095066--1e-8At1g22710SUC2 (SUCROSE-PROTON SYMPORTER 2)S.X.H.G.
0.4463.3HgAffx.19033.4.A1_atCK350593--6e-2At1g54410dehydrin family proteinS.X.H.G.
0.4360.6GmaAffx.47834.1.A1_atAF175392.1--3e-1At4g16330oxidoreductase/ oxidoreductase, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donorsS.X.H.G.
0.2430.9HgAffx.17984.1.S1_atCB238710--3e+0At3g24860hydroxyproline-rich glycoprotein family proteinS.X.H.G.
Click here to hide the above table.


Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
25.099.8GSM29292395_1465.1L.R283L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
13.299.5GSM201099Laser capture microdissected (LCM) axis plumule at the early maturation stage, biological replicate 2GSE8112Expression data from soybean seed compartments with embryos at the early maturation stage
8.999.2GSM191087Soybean_Cotyledon_II1GSE7881Expression data from soybean seed compartments with embryos at the cotyledon stage
8.499.1GSM29238660_1231.1F.R142U, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
7.498.9GSM308556Mature Soybean (Glycine max) pollen grains replicate 1GSE12286Genomic Expression Profiling of Mature Soybean (Glycine max) Pollen
6.098.5GSM308559Mature Soybean (Glycine max) pollen grains Replicate 2GSE12286Genomic Expression Profiling of Mature Soybean (Glycine max) Pollen
5.598.3GSM201124Laser capture microdissected (LCM) seed coat palisade at the early maturation stage, biological replicate 1GSE8112Expression data from soybean seed compartments with embryos at the early maturation stage
5.398.2GSM147947Laser capture microdissected (LCM) epidermis at the globular stage, biological replicate 3GSE6414Expression data from soybean seed compartments with embryos at the globular stage
5.298.1GSM24481318_VP9.I5U4.CEL, Experimental replicate 4GSE9687Expression patterns in time and space during P.sojae infection of soybean cultivars differing in quantitative resistance
5.198.1GSM201113Laser capture microdissected (LCM) cotyledon adaxial epidermis at the early maturation stage, biological replicate 2GSE8112Expression data from soybean seed compartments with embryos at the early maturation stage
Click here to hide the above table.


Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.113e-446GmaAffx.179.1.S1_atAW164770--3e+0At3g51100unknown proteinC.G.S.X.
0.058e-238GmaAffx.15916.1.A1_atAI442840--2e+0At5g50040invertase/pectin methylesterase inhibitor family proteinC.G.S.X.
0.033e-136HgAffx.10760.1.S1_atCB377741--5e+0At2g02835-C.G.S.X.
0.031e+034PsAffx.psHB017xA11f_s_atPsAffx.psHB017xA11f--5e+0At1g80133unknown proteinC.G.S.X.
0.021e+034PsAffx.C26000049_atPsAffx.C26000049--7e-1At5g20920EIF2 BETAC.G.S.X.
0.041e+034GmaAffx.25241.1.S1_atAI938766--1e-11At2g21480protein kinase family proteinC.G.S.X.
0.031e+034GmaAffx.15190.1.A1_atBU548967--4e-4At2g29940PDR3 (PLEIOTROPIC DRUG RESISTANCE 3)C.G.S.X.
0.031e+034GmaAffx.1301.22.S1_s_atBI945611--8e-2At5g65020ANNAT2 (Annexin Arabidopsis 2)C.G.S.X.
0.021e+034Gma.8459.1.S1_atAF249317.1Pti1 kinase-like protein-3e-37At2g47060serine/threonine protein kinase, putativeC.G.S.X.
Click here to hide the above table.



Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.022e-136Arabidopsis thalianaAt5g25980832667TGG2 (GLUCOSIDE GLUCOHYDROLASE 2)Myrosinase (thioglucoside glucohydrolase) gene involved in glucosinoloate metabolism.---C.G.S.X.
0.057e+030Hordeum vulgareContig25506_atContig25506--3e+0At3g03660WOX11 (WUSCHEL related homeobox 11)C.G.S.X.
0.047e+032Oryza sativaOsAffx.7280.1.S1_at---0C.G.S.X.
0.051e+034Populus trichocarpaPtpAffx.212870.1.S1_atpmrna25188hypothetical protein-1e-7At1g07520scarecrow transcription factor family proteinC.G.S.X.
0.044e+032Triticum aestivumTaAffx.85429.1.S1_atCA622832--4e+0At1g24350-C.G.S.X.
0.031e+032Vitis vinifera1607373_atBQ794528hypothetical protein LOC100266580-1e-13At3g58170BS14A (BET1P/SFT1P-LIKE PROTEIN 14A)C.G.S.X.
0.032e+032Zea maysZm.17682.1.S1_atCK369994--9e-1At1g07950surfeit locus protein 5 family protein / SURF5 family proteinC.G.S.X.
Click here to hide the above table.


Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
Click here to hide the above table.


Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
Click here to hide the above table.



Back to the CoP portal site

Back to the KAGIANA project homepage