CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID GmaAffx.18686.1.S1_at

Gene name

Organism Glycine max

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.53 74.2 GmaAffx.18686.1.S1_at BU548864 - - 5e-20 At1g31120 KUP10 S.X. H.G.
0.46 65.5 Gma.10967.1.S1_at BQ253089 - - 8e-34 At1g09970 LRR XI-23 S.X. H.G.
0.40 57.1 Gma.11997.1.S1_at BI971274 - - 5e-7 At1g61065 unknown protein S.X. H.G.
0.31 42.2 Gma.46.1.S1_at L28005.1 bZIP transcription factor bZIP52 /// transcription factor bZIP76 - 4e-6 At5g10030 TGA4 (TGACG MOTIF-BINDING FACTOR 4) S.X. H.G.
0.24 30.9 Gma.376.1.S1_a_at CD393508 - - 9e-19 At4g12080 DNA-binding family protein S.X. H.G.
0.23 29.9 Gma.11341.1.S1_at BG652352 - - 2e-7 At1g32700 zinc-binding family protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
7.0 98.8 GSM293110 25_C040.1O.SLO1P, Experimental replicate 1 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
5.2 98.1 GSM293333 22_1549.1Q.R078L, Experimental replicate 1 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
5.1 98.1 GSM292177 33_1020.1A.R011P, Experimental replicate 1 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.6 97.7 GSM293586 18_2092.2B.R298P, Experimental replicate 2 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.3 97.5 GSM292178 34-1006.1A.R003P, Experimental replicate 1 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.9 97.1 GSM293772 18_2164.2D.R027P, Experimental replicate 2 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.9 97.1 GSM293264 4_C058.1P.R9P1P, Experimental replicate 1 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.8 97.0 GSM292169 24_1018.1A.R010P, Experimental replicate 1 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.8 97.0 GSM293580 12_2096.2B.R046P, Experimental replicate 2 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.8 97.0 GSM293307 89_1202.1P.R124P, Experimental replicate 1 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 4e-3 44 GmaAffx.74050.1.S1_at BF596673 - - 8e-1 At3g14670 unknown protein C.G. S.X.
0.01 4e+0 34 PsAffx.C32000061_at PsAffx.C32000061 - - 2e+0 At1g01350 nucleic acid binding / protein binding / zinc ion binding C.G. S.X.
0.01 4e+0 34 HgAffx.13822.1.S1_at CD747856 - - 2e+0 At2g44000 - C.G. S.X.
0.02 4e+0 34 GmaAffx.47708.1.A1_at CD396238 - - 1e-12 At5g42250 alcohol dehydrogenase, putative C.G. S.X.
0.02 4e+0 34 GmaAffx.25015.1.S1_at AW349660 - - 5e+0 At4g10170 synaptobrevin-related family protein C.G. S.X.
0.01 4e+0 34 Gma.10826.6.S1_at BI786194 - - 6e-93 At5g55190 RAN3 (RAN GTPASE 3) C.G. S.X.
0.01 4e+0 34 Gma.10826.6.S1_x_at BI786194 - - 6e-93 At5g55190 RAN3 (RAN GTPASE 3) C.G. S.X.
0.01 1e+1 32 PsAffx.C78000024_at PsAffx.C78000024 - - 2e-1 At5g03280 EIN2 (ETHYLENE INSENSITIVE 2) C.G. S.X.
0.00 1e+1 32 PsAffx.C286000001_at PsAffx.C286000001 - - 3e-1 At4g29270 acid phosphatase class B family protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.23 5e-20 99 Arabidopsis thaliana At1g31120 839997 KUP10 potassium transporter - - - C.G. S.X.
0.18 6e-18 91 Hordeum vulgare Contig935_at Contig935 - - 3e-19 At1g31120 KUP10 C.G. S.X.
0.10 9e-8 59 Oryza sativa Os09g0563200 AK065464.1 - K+ potassium transporter family protein 2e-30 At1g31120 KUP10 C.G. S.X.
0.23 5e-30 133 Populus trichocarpa PtpAffx.16235.1.A1_at CV258216 hypothetical protein - 9e-20 At1g31120 KUP10 C.G. S.X.
0.21 5e-8 59 Triticum aestivum Ta.16671.1.S1_at CA610667 - - 4e-14 At1g31120 KUP10 C.G. S.X.
0.19 1e-45 182 Vitis vinifera 1607241_at CB980618 hypothetical protein LOC100264706 - 7e-21 At2g35060 KUP11 C.G. S.X.
0.19 6e-27 121 Zea mays Zm.13502.1.A1_at CA403391 hypothetical protein LOC100191398 - 9e-4 At2g35060 KUP11 C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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