Gene omics information

Query gene ID	GmaAffx.18316.1.S1_at
Gene name
Organism	Glycine max

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.71	87.8	GmaAffx.18316.1.S1_at	AW351166	-	-	3e-1	At5g62210	embryo-specific protein-related	S.X.	H.G.	Please select
0.44	63.3	GmaAffx.69424.1.S1_s_at	BQ081645	-	-	2e-1	At3g60080	zinc finger (C3HC4-type RING finger) family protein	S.X.	H.G.	Please select
0.33	46.1	GmaAffx.18316.2.S1_at	AI494765	-	-	1e-9	At4g34150	C2 domain-containing protein	S.X.	H.G.	Please select
0.02	4.5	Gma.4091.1.S1_at	BI315883	-	-	4e-2	At3g09770	zinc finger (C3HC4-type RING finger) family protein	S.X.	H.G.	Please select
0.01	3.4	GmaAffx.30877.1.S1_at	BE822745	-	-	1e+0	At1g59640	ZCW32	S.X.	H.G.	Please select
0.01	3.4	GmaAffx.86182.1.S1_at	BG047463	-	-	2e-7	At5g18520	-	S.X.	H.G.	Please select
0.01	3.4	GmaAffx.90612.1.S1_at	CF806337	-	-	2e-14	At5g63470	NF-YC4 (NUCLEAR FACTOR Y, SUBUNIT C4)	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
90.0	100.0	GSM292923	95_1465.1L.R283L, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
12.9	99.5	GSM292913	86_1447.1L.R273L, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
12.4	99.5	GSM292912	85_1467.1L.R284L, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
11.4	99.4	GSM292915	88_1481.1L.R291U, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
11.0	99.4	GSM292901	75_1457.1L.R279U, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
10.2	99.3	GSM292903	77_C199.1L.V7L1L, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
10.1	99.3	GSM292916	89_C203.1L.SLL1U, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
10.1	99.3	GSM292909	82_1447.1L.R273U, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
10.1	99.3	GSM292914	87_1471.1L.R286U, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
9.3	99.2	GSM292905	79_C211.1L.SLL3U, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
1.00	0	1084	GmaAffx.18316.1.S1_s_at	AW351166	-	-	3e-1	At5g62210	embryo-specific protein-related	C.G.	S.X.	Please select
0.53	4e-38	159	Gma.6753.1.S1_at	BU544741	-	-	4e-1	At5g35190	proline-rich extensin-like family protein	C.G.	S.X.	Please select
0.04	3e-2	40	HgAffx.18582.1.S1_at	CA940598	-	-	4e-3	At2g23430	ICK1	C.G.	S.X.	Please select
0.05	3e-2	40	GmaAffx.35554.1.S1_at	BE803000	-	-	8e-1	At4g00810	60S acidic ribosomal protein P1 (RPP1B)	C.G.	S.X.	Please select
0.02	1e-1	38	PsAffx.C120000037_at	PsAffx.C120000037	-	-	8e-1	At2g23310	ATRER1C1	C.G.	S.X.	Please select
0.03	1e-1	38	GmaAffx.73272.1.S1_at	BI967256	-	-	5e-7	At3g23290	-	C.G.	S.X.	Please select
0.04	1e-1	38	GmaAffx.38046.1.S1_at	BU760708	-	-	4e+0	At1g67785	unknown protein	C.G.	S.X.	Please select
0.04	1e-1	38	GmaAffx.18316.2.S1_at	AI494765	-	-	1e-9	At4g34150	C2 domain-containing protein	C.G.	S.X.	Please select
0.04	1e-1	38	Gma.7291.2.S1_s_at	BQ786355	-	-	1e-3	At3g61900	auxin-responsive family protein	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.04	3e-1	36	Arabidopsis thaliana	At5g62210	836342	embryo-specific protein-related	F:molecular_function unknown;P:biological_process unknown;C:anchored to membrane;MPOFVBA	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.03	1e-1	36	Hordeum vulgare	Contig18504_s_at	Contig18504	-	-	2e-5	At1g60940	SNRK2.10 (SNF1-RELATED PROTEIN KINASE 2.10)	C.G.	S.X.	Please select
0.03	9e-3	42	Oryza sativa	Os04g0393900	AK063305.1	-	Protein kinase domain containing protein	2e-23	At5g13160	PBS1 (avrPphB susceptible 1)	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.04	4e-1	36	Populus trichocarpa	PtpAffx.5850.3.A1_s_at	CV281939	hypothetical protein	-	1e+0	At1g56060	unknown protein	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.04	2e-2	40	Triticum aestivum	Ta.30755.3.S1_at	CA716191	-	-	9e-1	At1g12890	AP2 domain-containing transcription factor, putative	C.G.	S.X.	Please select
0.04	5e-3	40	Vitis vinifera	1617694_at	CB972462	hypothetical protein LOC100260852	-	1e-28	At2g20570	GPRI1 (GBF'S PRO-RICH REGION-INTERACTING FACTOR 1)	C.G.	S.X.	Please select
0.03	1e-1	36	Zea mays	Zm.13450.1.S1_at	AY109219.1	hypothetical protein LOC100278283	-	5e-3	At2g23310	ATRER1C1	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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