Gene omics information

Query gene ID GmaAffx.18223.1.A1_at
Gene name
Organism Glycine max


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.7790.3GmaAffx.18223.1.A1_atBU551287--3e-174Atcg00740-S.X.H.G.
0.4057.1Gma.12389.1.S1_atCD404170--0Atcg00160-S.X.H.G.
0.4057.1Gma.5584.6.S1_s_atBG047114--3e-15Atcg00640-S.X.H.G.
0.2735.7GmaAffx.80255.1.S1_atBE021600--7e-22Atcg00050-S.X.H.G.
0.1619.7GmaAffx.11697.1.S1_atCA851483--0Atcg01280-S.X.H.G.
0.047.0Gma.7497.1.S1_atCD393659OAS-TL4 cysteine synthase (OAS-TL4)-7e-60At2g43750OASB (O-ACETYLSERINE (THIOL) LYASE B)S.X.H.G.
Click here to hide the above table.


Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
21.099.7GSM238047Soybean-Mandarin-1-RMAGSE9374Exploration of microarrays as tools to assess substantial equivalence of genetically modified soybeans
19.399.7GSM238030Soybean-2601R-2-RMAGSE9374Exploration of microarrays as tools to assess substantial equivalence of genetically modified soybeans
19.099.7GSM238057Soybean-S03W4-1-RMAGSE9374Exploration of microarrays as tools to assess substantial equivalence of genetically modified soybeans
15.399.6GSM238059Soybean-S03W4-3-RMAGSE9374Exploration of microarrays as tools to assess substantial equivalence of genetically modified soybeans
13.599.5GSM238048Soybean-Mandarin-3-RMAGSE9374Exploration of microarrays as tools to assess substantial equivalence of genetically modified soybeans
11.499.4GSM245935Leaf_Water Control_Rep 3_48 h After TreatmentGSE9730Effect of foliar spray of lipo-chitooligosaccharide (Nod factor) on soybean leaf gene expression.
10.999.4GSM238061Soybean-S03W4-5-RMAGSE9374Exploration of microarrays as tools to assess substantial equivalence of genetically modified soybeans
10.999.4GSM238049Soybean-Mandarin-4-RMAGSE9374Exploration of microarrays as tools to assess substantial equivalence of genetically modified soybeans
10.799.4GSM209580resistant_48hours_rep1GSE8432Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhizi
10.599.3GSM245938Leaf_LCO treated_Rep 3_48 h After TreatmentGSE9730Effect of foliar spray of lipo-chitooligosaccharide (Nod factor) on soybean leaf gene expression.
Click here to hide the above table.


Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.043e-240GmaAffx.90361.1.S1_atCF806086--3e-35At4g18905transducin family protein / WD-40 repeat family proteinC.G.S.X.
0.032e+034GmaAffx.65551.1.S1_atCA784309--2e-1At3g08850RAPTOR1C.G.S.X.
0.017e+032PsAffx.C22000071_atPsAffx.C22000071--3e+0At3g29033glycine-rich proteinC.G.S.X.
0.017e+032PsAffx.C16000120_atPsAffx.C16000120--2e+1Atmg01250-C.G.S.X.
0.037e+032HgAffx.19227.1.S1_atCB377875--5e+0At2g03931-C.G.S.X.
0.037e+032HgAffx.17404.1.S1_atCB278952--6e-2At3g26790FUS3 (FUSCA 3)C.G.S.X.
0.027e+032HgAffx.10397.1.S1_atCD748202--2e+0At5g58240bis(5'-adenosyl)-triphosphatase, putativeC.G.S.X.
0.037e+032GmaAffx.92262.1.S1_atCF807987--3e+0At5g35540unknown proteinC.G.S.X.
0.037e+032GmaAffx.86247.1.S1_s_atBG238674--2e-11At1g07040unknown proteinC.G.S.X.
Click here to hide the above table.



Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.683e-174611Arabidopsis thalianaAtcg00740--RNA polymerase alpha subunit---C.G.S.X.
0.688e-59226Hordeum vulgareContig22529_atContig22529--1e-58Atcg00740-C.G.S.X.
0.473e-46186Oryza sativaOs01g0789400NM_195997.1-Alpha subunit of RNA polymerase2e-50Atcg00740-C.G.S.X.
0.513e-30133Populus trichocarpaPtpAffx.213371.1.S1_atpmrna26163--2e-15Atcg00740-C.G.S.X.
0.352e-39163Triticum aestivumTaAffx.129824.3.A1_atCA626300--1e-48Atcg00740-C.G.S.X.
0.230714Vitis vinifera1622010_atCF207538similar to RNA polymerase alpha subunit-0Atcg00740-C.G.S.X.
0.601e-69262Zea maysZmAffx.1511.1.S1_at11990232-52--4e-48Atcg00740-C.G.S.X.
Click here to hide the above table.


Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
Click here to hide the above table.


Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
Click here to hide the above table.



Back to the CoP portal site

Back to the KAGIANA project homepage