Gene omics information

Query gene ID	GmaAffx.18005.1.S1_at
Gene name
Organism	Glycine max

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.93	99.1	GmaAffx.18005.1.S1_at	BU765846	-	-	2e-13	At4g27630	GTG2 (GPCR-TYPE G PROTEIN 2)	S.X.	H.G.	Please select
0.38	53.3	GmaAffx.56943.1.S1_at	AW185138	-	-	1e+0	At3g56910	PSRP5 (PLASTID-SPECIFIC 50S RIBOSOMAL PROTEIN 5)	S.X.	H.G.	Please select
0.26	33.9	GmaAffx.65538.1.S1_s_at	CA783421	-	-	2e+0	At5g58260	-	S.X.	H.G.	Please select
0.26	33.9	GmaAffx.71188.3.S1_at	BU577382	-	-	2e-7	At4g18230	-	S.X.	H.G.	Please select
0.25	32.6	GmaAffx.22346.2.S1_at	BM177133	-	-	6e-9	At1g71080	unknown protein	S.X.	H.G.	Please select
0.12	15.1	GmaAffx.1301.64.S1_at	BG042384	-	-	6e-21	At1g63690	protease-associated (PA) domain-containing protein	S.X.	H.G.	Please select
0.12	15.1	GmaAffx.7564.2.S1_at	BG509629	-	-	2e-126	At5g64070	PI-4KBETA1 (PHOSPHATIDYLINOSITOL 4-OH KINASE BETA1)	S.X.	H.G.	Please select
0.11	14.2	GmaAffx.70177.1.S1_at	CA785313	-	-	3e+0	At3g12345	unknown protein	S.X.	H.G.	Please select
0.10	13.0	GmaAffx.86611.4.S1_at	CA937425	-	-	8e-4	At5g13340	unknown protein	S.X.	H.G.	Please select
0.10	13.0	GmaAffx.76735.1.S1_at	BG405106	-	-	8e-4	At5g44570	unknown protein	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
8.3	99.1	GSM292923	95_1465.1L.R283L, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
6.8	98.7	GSM244916	4_SLO.I3U1.CEL, Experimental replicate 1	GSE9687	Expression patterns in time and space during P.sojae infection of soybean cultivars differing in quantitative resistance
5.6	98.3	GSM292838	18_C211.1L.SLL3L, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.1	97.3	GSM292198	5_C008.1A.V7A2P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.0	97.2	GSM292230	28_1045.1B.R025L, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.8	97.0	GSM294684	54_2584.2M.R026P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.6	96.7	GSM294428	83_2450.2J.R161P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.5	96.6	GSM147935	Laser capture microdissected (LCM) embryo proper at the globular stage, biological replicate 3	GSE6414	Expression data from soybean seed compartments with embryos at the globular stage
3.5	96.6	GSM292825	82_C184.1K.R9K1P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.4	96.4	GSM294348	10_3163.2J.SLJ1L, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.01	7e-2	38	PsAffx.C159000014_at	PsAffx.C159000014	-	-	3e+0	Atmg00710	-	C.G.	S.X.	Please select
0.02	7e-2	38	PsAffx.C133000011_at	PsAffx.C133000011	-	-	6e-2	At5g51680	hydroxyproline-rich glycoprotein family protein	C.G.	S.X.	Please select
0.02	3e-1	36	PsAffx.C48000062_at	PsAffx.C48000062	-	-	6e-1	At2g30590	WRKY21	C.G.	S.X.	Please select
0.03	3e-1	36	GmaAffx.12923.2.S1_at	BF067691	-	-	1e-3	At1g54200	unknown protein	C.G.	S.X.	Please select
0.04	1e+0	34	PsAffx.psZS014xL13f_s_at	PsAffx.psZS014xL13f	-	-	1e+1	At5g50345	-	C.G.	S.X.	Please select
0.02	1e+0	34	PsAffx.C56000051_at	PsAffx.C56000051	-	-	3e+0	At5g18850	unknown protein	C.G.	S.X.	Please select
0.01	1e+0	34	PsAffx.C30000013_at	PsAffx.C30000013	-	-	3e-2	At2g26940	zinc finger (C2H2 type) family protein	C.G.	S.X.	Please select
0.01	1e+0	34	PsAffx.C138000050_at	PsAffx.C138000050	-	-	1e+0	At5g41980	unknown protein	C.G.	S.X.	Please select
0.01	1e+0	34	PsAffx.C116000016_at	PsAffx.C116000016	-	-	1e-3	At4g17620	glycine-rich protein	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.20	2e-13	75	Arabidopsis thaliana	At4g27630	828874	GTG2 (GPCR-TYPE G PROTEIN 2)	Encodes a GPCR-type G protein receptor with nine predicted transmembrane domains. The protein binds abscisic acid (ABA) and is predicted to function as an ABA receptor. It has GTP-binding and GTPase activity and binds to ABA more effectively in the presence of GDP. GTG2 binds to GPA1, the alpha subunit of the heterotrimeric G protein. GPA1 (in its GTP-bound state) affects the GTP binding and GTPase activity of GTG2 and may act to down-regulate GTG2 binding to ABA. GTG2 is widely expressed throughout the plant and appears to be involved in the regulation of several ABA-dependent responses including seed germination, plant development, and promotion of stomatal closure. GTG2 transcript levels do not appear to change in response to ABA or abiotic stresses.	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.04	4e-1	34	Hordeum vulgare	AJ303111_s_at	AJ303111	-	-	1e+1	At3g07200	zinc finger (C3HC4-type RING finger) family protein	C.G.	S.X.	Please select
0.09	4e-7	56	Oryza sativa	Os04g0600800	9632.m04940	-	Conserved hypothetical protein	1e-25	At4g27630	GTG2 (GPCR-TYPE G PROTEIN 2)	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.50	2e-26	119	Populus trichocarpa	PtpAffx.137439.1.S1_s_at	DN499918	hypothetical protein	-	7e-24	At1g64990	GTG1 (GPCR-TYPE G PROTEIN 1)	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.04	2e-1	36	Triticum aestivum	Ta.5248.3.S1_a_at	CA661253	-	-	4e+0	At2g45320	unknown protein	C.G.	S.X.	Please select
0.03	6e-2	36	Vitis vinifera	1611401_at	CB920876	-	-	3e-2	At3g14160	oxidoreductase	C.G.	S.X.	Please select
0.04	1e+0	32	Zea mays	ZmAffx.729.1.S1_at	AI740018	-	-	2e-4	At4g02450	glycine-rich protein	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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