Gene omics information

Query gene ID GmaAffx.17452.1.S1_at
Gene name
Organism Glycine max


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.5576.3GmaAffx.17452.1.S1_atAW458587--2e-1At3g12370ribosomal protein L10 family proteinS.X.H.G.
0.6986.8GmaAffx.93356.1.S1_atCF807350--2e+0At5g47870unknown proteinS.X.H.G.
0.5678.2Gma.4438.4.S1_x_atBE021855--2e-1At5g63085-S.X.H.G.
0.5678.2GmaAffx.84058.1.A1_s_atCD396207--7e-4At5g24530DMR6 (DOWNY MILDEW RESISTANT 6)S.X.H.G.
0.5678.2Gma.4438.1.S1_atCD396138--4e-5At5g24530DMR6 (DOWNY MILDEW RESISTANT 6)S.X.H.G.
0.5678.2Gma.4438.3.S1_x_atBU764535--8e-1At5g50050invertase/pectin methylesterase inhibitor family proteinS.X.H.G.
0.5678.2Gma.4438.2.S1_atBQ630502--5e+0At5g33330RNase H domain-containing proteinS.X.H.G.
0.5374.2GmaAffx.82048.1.S1_atBI320672--1e-2At4g13195CLE44 (CLAVATA3/ESR-RELATED 44)S.X.H.G.
0.4259.3Gma.7470.1.A1_atCD413105--4e-16At2g31880leucine-rich repeat transmembrane protein kinase, putativeS.X.H.G.
0.3954.5Gma.3367.1.S1_atBU083449--3e+0At2g27180unknown proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
219.2100.0GSM209598resistant_48hours_rep3GSE8432Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhizi
206.0100.0GSM209599susceptible_48hours_rep3GSE8432Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhizi
34.399.9GSM170928V2 Control, biological rep3GSE7108Gene expression analysis in soybean with respect to Pahakopsora pachyrhizii at V2 growth stage
30.299.8GSM245934Leaf_Water Control_Rep 2_48 h After TreatmentGSE9730Effect of foliar spray of lipo-chitooligosaccharide (Nod factor) on soybean leaf gene expression.
24.699.8GSM245935Leaf_Water Control_Rep 3_48 h After TreatmentGSE9730Effect of foliar spray of lipo-chitooligosaccharide (Nod factor) on soybean leaf gene expression.
22.999.8GSM29469261_2589.2M.R273L, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
17.499.7GSM209589resistant_48hours_rep2GSE8432Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhizi
14.699.6GSM245933Leaf_Water Control_Rep 1_48 h After TreatmentGSE9730Effect of foliar spray of lipo-chitooligosaccharide (Nod factor) on soybean leaf gene expression.
13.999.6GSM29291386_1447.1L.R273L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
12.899.5GSM29360333_2059.2B.R199L, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.115e-342GmaAffx.83086.1.S1_atBF071084--4e+0At5g21090leucine-rich repeat protein, putativeC.G.S.X.
0.001e+034PsAffx.C118000038_atPsAffx.C118000038--6e-1At1g54410dehydrin family proteinC.G.S.X.
0.041e+034GmaAffx.4195.1.S1_atBG352938--1e-3At3g06035unknown proteinC.G.S.X.
0.031e+034Gma.16140.1.S1_atCD414364--1e-4At3g63170chalcone isomeraseC.G.S.X.
0.024e+032PsAffx.CL1184Contig1_atPsAffx.CL1184Contig1--1e-1At2g39320OTU-like cysteine protease family proteinC.G.S.X.
0.004e+032PsAffx.C9000121_atPsAffx.C9000121--3e-1At2g17390AKR2B (ANKYRIN REPEAT-CONTAINING 2B)C.G.S.X.
0.014e+032PsAffx.C62000006_atPsAffx.C62000006--2e-1At5g25390SHN2 (shine2)C.G.S.X.
0.014e+032PsAffx.C60000031_atPsAffx.C60000031--1e-1At3g20310ERF7 (ETHYLINE RESPONSE FACTOR 7)C.G.S.X.
0.024e+032PsAffx.C48000049_atPsAffx.C48000049--3e-3At3g51880HMGB1 (HIGH MOBILITY GROUP B 1)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.042e-136Arabidopsis thalianaAt3g12370820415ribosomal protein L10 family proteinF:structural constituent of ribosome;P:translation, ribosome biogenesis;C:ribosome, intracellular;BOP---C.G.S.X.
0.034e-134Hordeum vulgareContig5667_atContig5667--8e-8At4g16450unknown proteinC.G.S.X.
0.026e-342Oryza sativaOsAffx.7303.1.S1_at---0C.G.S.X.
0.052e-240Populus trichocarpaPtpAffx.225873.1.S1_atpmrna45515hypothetical protein-5e+0At4g09984LCR34 (Low-molecular-weight cysteine-rich 34)C.G.S.X.
0.043e+032Triticum aestivumTaAffx.51497.1.S1_atCA724309--4e+0At3g09380-C.G.S.X.
0.069e-132Vitis vinifera1618088_atCF215074hypothetical protein LOC100250661 /// hypothetical protein LOC100265273-2e+0At1g61105disease resistance protein-relatedC.G.S.X.
0.045e+030Zea maysZmAffx.562.1.A1_atAI714592--3e+0At4g17483palmitoyl protein thioesterase family proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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