CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID GmaAffx.17284.1.A1_s_at

Gene name

Organism Glycine max

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.91 98.6 GmaAffx.17284.1.A1_s_at BE659740 - - 2e+0 At5g14330 unknown protein S.X. H.G.
0.67 86.1 Gma.3730.2.S1_a_at BI320846 transcription factor - 9e-15 At1g80840 WRKY40 S.X. H.G.
0.60 80.7 GmaAffx.91768.1.S1_s_at CF807493 transcription factor - 1e-6 At2g25000 WRKY60 S.X. H.G.
0.44 63.3 GmaAffx.50095.2.A1_s_at CD417493 - - 3e+0 At4g30670 unknown protein S.X. H.G.
0.43 60.6 Gma.10818.2.S1_at AW568786 WRKY78 - 8e-23 At1g80840 WRKY40 S.X. H.G.
0.33 46.1 Gma.6557.1.S1_s_at BG726161 - - 2e-8 At1g27930 unknown protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
8.7 99.1 GSM292208 70_C004.1A.R9A1P, Experimental replicate 1 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
7.1 98.8 GSM292228 23_1052.1B.R029P, Experimental replicate 1 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
7.0 98.8 GSM292469 68_1280.1G.R178P, Experimental replicate 1 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
6.4 98.6 GSM292210 72-C002.1A.V7A1P, Experimental replicate 1 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
6.1 98.5 GSM292227 22_1043.1B.R024U, Experimental replicate 1 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
5.9 98.5 GSM293600 30_2081.2B.R035L, Experimental replicate 2 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
5.9 98.5 GSM292205 67-C015.1A.V7A3U, Experimental replicate 1 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
5.9 98.5 GSM292459 59_1282.1G.R179P, Experimental replicate 1 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
5.7 98.4 GSM292184 45_C015.1A.V7A3L, Experimental replicate 1 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
5.3 98.2 GSM292238 45_1051.1B.R029L, Experimental replicate 1 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.66 1e-64 246 GmaAffx.17284.2.S1_at AW153194 Transcription factor (WRKY56) - 6e-1 At1g74458 unknown protein C.G. S.X.
0.05 6e-2 38 Gma.5778.1.S1_at BM091675 - - 7e-1 At2g44920 thylakoid lumenal 15 kDa protein, chloroplast C.G. S.X.
0.04 6e-2 38 Gma.1322.1.S1_at AW184979 - - 1e-34 At3g14890 phosphoesterase C.G. S.X.
0.05 2e-1 36 GmaAffx.83574.3.S1_s_at BM309223 - - 3e+0 At3g16895 - C.G. S.X.
0.02 2e-1 36 GmaAffx.83574.1.S1_at BU763754 - - 9e-1 At5g53880 unknown protein C.G. S.X.
0.02 2e-1 36 Gma.4754.1.S1_at CD394174 - - 1e-20 At5g19150 carbohydrate kinase family C.G. S.X.
0.03 2e-1 36 Gma.16239.1.S1_at BE659018 - - 3e-30 At1g28520 VOZ1 (VASCULAR PLANT ONE ZINC FINGER PROTEIN) C.G. S.X.
0.04 2e-1 36 Gma.12435.1.S1_at BE657686 - - 2e-2 At5g54490 PBP1 (PINOID-BINDING PROTEIN 1) C.G. S.X.
0.04 2e-1 36 Gma.12435.1.S1_x_at BE657686 - - 2e-2 At5g54490 PBP1 (PINOID-BINDING PROTEIN 1) C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.04 2e+0 32 Arabidopsis thaliana At5g14330 831283 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P - - - C.G. S.X.
0.04 3e-1 34 Hordeum vulgare HVSMEg0010D04f2_at HVSMEg0010D04f2 - - 1e+0 At5g41640 unknown protein C.G. S.X.
0.03 1e+0 34 Oryza sativa Os01g0644000 AK063835.1 - Twin-arginine translocation pathway signal domaincontaining protein 4e-1 At5g01610 unknown protein C.G. S.X.
0.04 6e-2 38 Populus trichocarpa Ptp.7077.1.S1_at DN488141 - - 2e+1 At4g32800 AP2 domain-containing transcription factor TINY, putative C.G. S.X.
0.05 4e-2 38 Triticum aestivum Ta.12452.1.S1_at CA684419 - - 3e+0 At2g24970 unknown protein C.G. S.X.
0.05 3e-3 40 Vitis vinifera 1617855_at CD799718 - - 9e-1 At5g65220 ribosomal protein L29 family protein C.G. S.X.
0.04 3e-1 34 Zea mays Zm.14917.1.A1_at BM378490 - - 9e-1 At1g04330 unknown protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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