Gene omics information

Query gene ID	GmaAffx.15284.1.S1_at
Gene name
Organism	Glycine max

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.61	81.8	GmaAffx.15284.1.S1_at	BE822730	-	-	6e+0	At1g21880	LYM1 (LYSM DOMAIN GPI-ANCHORED PROTEIN 1 PRECURSOR)	S.X.	H.G.	Please select
0.73	88.9	Gma.9020.2.S1_at	AI736080	-	-	1e-14	At2g43970	La domain-containing protein	S.X.	H.G.	Please select
0.59	79.5	GmaAffx.89144.1.A1_s_at	CK605580	-	-	2e-21	At3g60600	VAP (VESICLE ASSOCIATED PROTEIN)	S.X.	H.G.	Please select
0.57	78.8	Gma.12593.3.S1_at	AW756323	-	-	5e-34	At2g32170	-	S.X.	H.G.	Please select
0.54	74.8	GmaAffx.33620.2.S1_at	BM731339	-	-	2e-14	At1g51730	RWD domain-containing protein	S.X.	H.G.	Please select
0.49	68.3	GmaAffx.85638.1.S1_at	BF425777	-	-	4e-13	At5g55000	FIP2	S.X.	H.G.	Please select
0.48	67.7	GmaAffx.22482.1.S1_x_at	AW185059	-	-	1e-28	At3g46460	UBC13 (ubiquitin-conjugating enzyme 13)	S.X.	H.G.	Please select
0.48	67.7	Gma.12030.3.S1_a_at	BG359479	-	-	4e+0	At3g47341	unknown protein	S.X.	H.G.	Please select
0.44	63.3	GmaAffx.34491.1.S1_at	BE820865	-	-	9e-13	At1g16360	LEM3 (ligand-effect modulator 3) family protein / CDC50 family protein	S.X.	H.G.	Please select
0.41	58.1	Gma.4995.2.S1_at	AW830184	-	-	3e-4	At5g13020	emsy N terminus domain-containing protein / ENT domain-containing protein	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
5.1	98.1	GSM293911	5_2236.2E.R249P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.8	97.9	GSM293060	61_C034.1N.R9N3P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.8	97.9	GSM294132	86_3112.2G.R9G1P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.4	97.6	GSM293390	74_1588.1Q.R230P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.2	97.4	GSM294133	87_2304.2G.R142P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.0	97.2	GSM294130	84_2328.2G.R265P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.0	97.2	GSM293289	72_1238.1P.R145P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.9	97.1	GSM294075	31_3126.2G.R9G3P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.9	97.1	GSM294293	45_3162.2I.R9I3P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.9	97.1	GSM293247	34_C066.1P.R9P2P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.14	3e-45	182	Gma.7621.1.S1_at	BU765757	-	-	3e+0	At5g35740	glycosyl hydrolase family protein 17	C.G.	S.X.	Please select
0.24	8e-37	155	GmaAffx.15284.2.S1_at	BU927192	-	-	9e-1	At5g12880	proline-rich family protein	C.G.	S.X.	Please select
0.06	2e-3	44	GmaAffx.48640.1.S1_at	AW184861	-	-	6e-5	At1g06230	GTE4 (GLOBAL TRANSCRIPTION FACTOR GROUP E 4)	C.G.	S.X.	Please select
0.03	5e-1	36	HgAffx.3501.1.A1_at	CK349189	-	-	4e+0	At5g47410	unknown protein	C.G.	S.X.	Please select
0.03	5e-1	36	HgAffx.3501.1.S1_at	CK349189	-	-	4e+0	At5g47410	unknown protein	C.G.	S.X.	Please select
0.03	2e+0	34	HgAffx.20940.1.A1_at	CK349057	-	-	3e+0	At5g26060	S1 self-incompatibility protein-related	C.G.	S.X.	Please select
0.03	2e+0	34	HgAffx.20940.1.S1_at	BI748813	-	-	3e+0	At5g26060	S1 self-incompatibility protein-related	C.G.	S.X.	Please select
0.03	2e+0	34	GmaAffx.37699.1.S1_at	BI320536	-	-	5e-21	At5g67520	adenylylsulfate kinase, putative	C.G.	S.X.	Please select
0.01	8e+0	32	PsAffx.C338000008_at	PsAffx.C338000008	-	-	3e+0	At5g58540	protein kinase family protein	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.02	6e+0	32	Arabidopsis thaliana	At1g21880	838790	LYM1 (LYSM DOMAIN GPI-ANCHORED PROTEIN 1 PRECURSOR)	F:molecular_function unknown;P:cell wall macromolecule catabolic process;C:anchored to plasma membrane, plasma membrane, anchored to membrane;PBOF	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.02	7e-1	34	Hordeum vulgare	Contig22223_at	Contig22223	-	-	4e-1	At1g29000	heavy-metal-associated domain-containing protein	C.G.	S.X.	Please select
0.04	7e-4	46	Oryza sativa	Os07g0507700	AK102283.1	-	Bromodomain containing protein	8e-8	At3g27260	GTE8	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.04	1e-1	38	Populus trichocarpa	PtpAffx.212851.1.S1_at	pmrna25148	global transcription factor group	-	2e-2	At5g63330	-	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.04	2e-3	44	Triticum aestivum	Ta.6142.1.A1_at	BQ169906	-	-	1e-2	At5g63330	-	C.G.	S.X.	Please select
0.03	2e+0	32	Vitis vinifera	1618536_at	CB348415	-	-	1e+0	At5g22930	unknown protein	C.G.	S.X.	Please select
0.03	1e+1	30	Zea mays	ZmAffx.632.1.A1_at	AI715060	-	-	3e+0	At2g31370	bZIP transcription factor (POSF21)	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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