Gene omics information

Query gene ID	GmaAffx.14915.1.S1_at
Gene name
Organism	Glycine max

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.89	93.5	GmaAffx.14915.1.S1_at	BE057713	-	-	3e-5	At1g66260	RNA and export factor-binding protein, putative	S.X.	H.G.	Please select
0.48	67.7	Gma.13170.1.S1_at	CD407100	-	-	1e-2	At5g65210	TGA1	S.X.	H.G.	Please select
0.47	66.6	Gma.7365.2.A1_a_at	BE823623	-	-	5e-2	At5g46750	AGD9 (ARF-GAP DOMAIN 9)	S.X.	H.G.	Please select
0.39	54.5	GmaAffx.51470.1.S1_at	CD390659	-	-	6e-27	At2g30710	RabGAP/TBC domain-containing protein	S.X.	H.G.	Please select
0.37	51.7	Gma.7945.1.S1_at	BU551250	-	-	2e-36	At5g16040	regulator of chromosome condensation (RCC1) family protein	S.X.	H.G.	Please select
0.36	50.8	Gma.7581.1.S1_at	BI969748	-	-	1e-2	At5g13300	SFC (SCARFACE)	S.X.	H.G.	Please select
0.35	48.6	Gma.9584.1.A1_s_at	BU544192	-	-	2e-5	At3g52640	nicastrin-related	S.X.	H.G.	Please select
0.34	47.2	GmaAffx.66034.1.S1_at	AW351123	-	-	3e-4	At5g11030	ALF4 (ABERRANT LATERAL ROOT FORMATION 4)	S.X.	H.G.	Please select
0.32	43.7	Gma.17588.2.S1_a_at	AW351318	-	-	9e-1	Atmg00860	-	S.X.	H.G.	Please select
0.31	42.2	Gma.7461.1.A1_at	BU547859	-	-	4e-1	At4g26290	unknown protein	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
4.8	97.9	GSM293374	5_1574.1Q.R160P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.6	97.7	GSM293335	24_1568.1Q.R156P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.2	97.4	GSM293188	70_1109.1O.R069U, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.2	97.4	GSM293594	25_2056.2B.R020P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.1	97.3	GSM293653	79_2062.2B.R280P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.9	97.1	GSM293578	10_2053.2B.R307U, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.7	96.8	GSM293604	34_2072.2B.R303P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.6	96.7	GSM293654	7_2070.2B.R213P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.6	96.7	GSM293703	3_2100.2C.R011P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.6	96.7	GSM293616	45_3030.2B.R9B2P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.66	3e-113	408	Gma.12187.1.A1_at	AW734314	-	-	3e-4	At5g37720	RNA and export factor-binding protein, putative	C.G.	S.X.	Please select
0.66	3e-113	408	Gma.12187.1.A1_x_at	AW734314	-	-	3e-4	At5g37720	RNA and export factor-binding protein, putative	C.G.	S.X.	Please select
0.66	3e-113	408	Gma.12187.1.A1_s_at	AW734314	-	-	3e-4	At5g37720	RNA and export factor-binding protein, putative	C.G.	S.X.	Please select
0.04	2e-6	54	GmaAffx.55911.1.S1_at	BQ742842	-	-	4e+0	At4g30450	glycine-rich protein	C.G.	S.X.	Please select
0.05	2e-6	54	GmaAffx.43220.1.A1_at	CD415089	-	-	3e+0	At5g38140	NF-YC12 (NUCLEAR FACTOR Y, SUBUNIT C12)	C.G.	S.X.	Please select
0.05	2e-6	54	Gma.2681.1.S1_s_at	CA853601	-	-	3e+0	At3g51370	protein phosphatase 2C, putative / PP2C, putative	C.G.	S.X.	Please select
0.04	9e-6	52	HgAffx.15495.1.S1_at	CB826522	-	-	4e+0	At1g03180	unknown protein	C.G.	S.X.	Please select
0.04	9e-6	52	GmaAffx.77562.1.S1_at	BM522902	-	-	3e+0	At5g09920	NRPB4	C.G.	S.X.	Please select
0.04	9e-6	52	GmaAffx.65818.1.A1_at	CD390644	-	-	2e-1	At2g18196	metal ion binding	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.07	3e-5	50	Arabidopsis thaliana	At1g66260	842943	RNA and export factor-binding protein, putative	F:nucleotide binding, nucleic acid binding;P:biological_process unknown;C:cellular_component unknown;MFPOBV	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.04	1e-5	50	Hordeum vulgare	Contig1267_at	Contig1267	-	-	5e-18	At1g02500	SAM1 (S-ADENOSYLMETHIONINE SYNTHETASE 1)	C.G.	S.X.	Please select
0.05	2e-1	38	Oryza sativa	Os06g0256200	AK072983.1	-	Hin19 (Fragment)	9e-1	At1g72080	unknown protein	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.11	1e-17	91	Populus trichocarpa	Ptp.2548.1.S1_s_at	BU812520	hypothetical protein	-	2e-16	At1g66260	RNA and export factor-binding protein, putative	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.07	3e-8	59	Triticum aestivum	Ta.15151.1.S1_at	CA691622	-	-	4e-1	At1g17400	unknown protein	C.G.	S.X.	Please select
0.03	8e-6	50	Vitis vinifera	1613755_at	CB975521	hypothetical protein LOC100253264	-	9e-2	At4g04080	ISU3 (ISCU-LIKE 3)	C.G.	S.X.	Please select
0.03	1e-5	50	Zea mays	Zm.15768.1.A1_at	CD446659	hypothetical protein LOC100194013	-	3e-14	At2g21190	ER lumen protein retaining receptor family protein	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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