CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID GmaAffx.14871.1.S1_at

Gene name

Organism Glycine max

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.71 87.8 GmaAffx.14871.1.S1_at BG510693 - - 9e-1 At3g01760 lysine and histidine specific transporter, putative S.X. H.G.
0.73 88.9 GmaAffx.17305.1.S1_at BM524663 - - 3e+0 At5g61650 CYCP4 S.X. H.G.
0.67 86.1 Gma.7924.3.S1_a_at BI787925 - - 2e-3 At4g24290 - S.X. H.G.
0.56 78.2 Gma.7924.3.S1_at BI787925 - - 2e-3 At4g24290 - S.X. H.G.
0.42 59.3 GmaAffx.82626.1.S1_at BM108148 - - 1e+0 At5g25600 - S.X. H.G.
0.40 57.1 GmaAffx.12540.1.S1_at BE474761 - - 1e-6 At1g33770 protein kinase family protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
5.1 98.1 GSM293800 43_2177.2D.R141L, Experimental replicate 2 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
5.1 98.1 GSM292412 16_1250.1G.R155P, Experimental replicate 1 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
5.0 98.0 GSM244781 10_VP9.I3L1.CEL, Experimental replicate 1 GSE9687 Expression patterns in time and space during P.sojae infection of soybean cultivars differing in quantitative resistance
4.9 98.0 GSM244916 4_SLO.I3U1.CEL, Experimental replicate 1 GSE9687 Expression patterns in time and space during P.sojae infection of soybean cultivars differing in quantitative resistance
4.9 98.0 GSM293802 45_3067.2D.R9D3L, Experimental replicate 2 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.6 97.7 GSM292510 26_1317.1H.R200L, Experimental replicate 1 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.5 97.7 GSM244829 21_VP9.I3U1.CEL, Experimental replicate 1 GSE9687 Expression patterns in time and space during P.sojae infection of soybean cultivars differing in quantitative resistance
4.4 97.6 GSM294272 26_2427.2I.R297L, Experimental replicate 2 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.3 97.5 GSM292481 79_1257.1G.R164L, Experimental replicate 1 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.2 97.4 GSM293797 40_2179.2D.R304L, Experimental replicate 2 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.04 2e-2 40 HgAffx.10513.1.S1_at CB377988 - - 4e+0 At4g35320 unknown protein C.G. S.X.
0.01 5e+0 32 PsAffx.C83000040_at PsAffx.C83000040 - - 2e+0 At3g06490 MYB108 (myb domain protein 108) C.G. S.X.
0.03 5e+0 32 GmaAffx.91156.1.S1_x_at CF806881 - - 3e-1 At5g36970 NHL25 (NDR1/HIN1-LIKE 25) C.G. S.X.
0.03 5e+0 32 GmaAffx.91156.1.S1_at CF806881 - - 3e-1 At5g36970 NHL25 (NDR1/HIN1-LIKE 25) C.G. S.X.
0.03 5e+0 32 GmaAffx.57896.2.S1_at AW830233 - - 5e-3 At4g13310 CYP71A20 C.G. S.X.
0.04 5e+0 32 GmaAffx.1338.1.S1_at BI967589 - - 1e+0 At5g16453 - C.G. S.X.
0.03 5e+0 32 Gma.9148.1.S1_at CA786051 - - 1e+0 At3g27550 group II intron splicing factor CRS1-related C.G. S.X.
0.03 5e+0 32 Gma.8259.1.S1_at BU549783 - - 2e-48 At1g47550 unknown protein C.G. S.X.
0.02 5e+0 32 Gma.7438.1.S1_at BQ743019 - - 8e-12 At5g23410 - C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 9e-1 34 Arabidopsis thaliana At3g01760 821086 lysine and histidine specific transporter, putative F:amino acid transmembrane transporter activity, amine transmembrane transporter activity;P:amino acid transport;C:membrane;MPFOBAV - - - C.G. S.X.
0.04 2e+0 32 Hordeum vulgare Contig18187_at Contig18187 - - 2e+0 At3g44860 FAMT (farnesoic acid carboxyl-O-methyltransferase) C.G. S.X.
0.04 4e-1 36 Oryza sativa Os03g0172700 AK111307.1 - Hypothetical protein 1e+0 At2g40500 protein kinase family protein C.G. S.X.
0.04 5e-6 52 Populus trichocarpa PtpAffx.204500.1.S1_s_at pmrna8828 lysine/histidine transporter /// lysine/histidine transporter - 2e-7 At1g47670 amino acid transporter family protein C.G. S.X.
0.04 6e-2 38 Triticum aestivum Ta.8395.1.S1_x_at BQ161837 - - 2e-5 At4g10265 wound-responsive protein, putative C.G. S.X.
0.11 5e-9 59 Vitis vinifera 1613837_at CF605759 hypothetical protein LOC100248706 - 4e-4 At1g47670 amino acid transporter family protein C.G. S.X.
0.04 2e+0 32 Zea mays Zm.5938.2.A1_a_at AI665871 - - 8e-1 At4g08390 SAPX (STROMAL ASCORBATE PEROXIDASE) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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