CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID GmaAffx.14030.1.S1_at

Gene name

Organism Glycine max

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.56 78.2 GmaAffx.14030.1.S1_at BE021503 - - 3e-2 At1g23120 major latex protein-related / MLP-related S.X. H.G.
0.67 86.1 GmaAffx.88414.1.S1_at CA820359 - - 2e-11 At5g10030 TGA4 (TGACG MOTIF-BINDING FACTOR 4) S.X. H.G.
0.67 86.1 Gma.6717.1.S1_at BU763455 - - 9e-3 At1g44800 nodulin MtN21 family protein S.X. H.G.
0.53 74.2 Gma.9966.1.S1_at CD396068 - - 4e-1 At3g55790 unknown protein S.X. H.G.
0.44 63.3 GmaAffx.82582.1.S1_at BM139949 - - 6e-3 At2g16385 unknown protein S.X. H.G.
0.40 57.1 Gma.1619.1.S1_at AW472195 - - 1e-5 At1g36070 WD-40 repeat family protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
8.0 99.0 GSM293772 18_2164.2D.R027P, Experimental replicate 2 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
6.5 98.7 GSM293586 18_2092.2B.R298P, Experimental replicate 2 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
6.0 98.5 GSM292852 30_1463.1L.R282L, Experimental replicate 1 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
5.8 98.4 GSM292512 28_1284.1H.R180P, Experimental replicate 1 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
5.0 98.0 GSM293718 53_2144.2C.R109P, Experimental replicate 2 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.9 98.0 GSM292886 61_1483.1L.R292U, Experimental replicate 1 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.6 97.7 GSM292825 82_C184.1K.R9K1P, Experimental replicate 1 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.2 97.4 GSM292864 41_1466.1L.R283P, Experimental replicate 1 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.1 97.3 GSM293565 78_2006.2A.R146P, Experimental replicate 2 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.1 97.3 GSM293835 75_2148.2D.R010P, Experimental replicate 2 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.62 2e-43 176 Gma.7864.1.S1_a_at BQ611662 - - 1e+0 At5g47320 RPS19 (RIBOSOMAL PROTEIN S19) C.G. S.X.
0.03 6e-4 46 GmaAffx.27237.1.S1_at BG725566 - - 6e-4 At2g26110 unknown protein C.G. S.X.
0.03 6e-1 36 PsAffx.C72000037_at PsAffx.C72000037 - - 7e+0 At5g65300 unknown protein C.G. S.X.
0.03 6e-1 36 PsAffx.C450000004_at PsAffx.C450000004 - - 7e-2 At4g02800 unknown protein C.G. S.X.
0.02 6e-1 36 PsAffx.C2000193_at PsAffx.C2000193 - - 2e-1 At1g56630 triacylglycerol lipase C.G. S.X.
0.03 6e-1 36 GmaAffx.61126.1.S1_at BI321919 - - 8e-5 At1g30750 unknown protein C.G. S.X.
0.02 6e-1 36 Gma.8308.1.S1_at AW351085 - - 2e-1 At4g02541 unknown protein C.G. S.X.
0.02 6e-1 36 Gma.1975.4.S1_at CD403154 - - 7e-30 At5g59910 HTB4 C.G. S.X.
0.02 6e-1 36 Gma.1975.3.S1_at CD393546 - - 4e-29 At5g59910 HTB4 C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.04 3e-2 40 Arabidopsis thaliana At1g23120 838920 major latex protein-related / MLP-related F:molecular_function unknown;P:response to biotic stimulus, defense response;C:cellular_component unknown;P - - - C.G. S.X.
0.03 8e-4 44 Hordeum vulgare Contig10874_at Contig10874 - - 1e-1 At1g76750 unknown protein C.G. S.X.
0.04 8e-4 46 Oryza sativa Os10g0450900 AK064065.1 - Glycine-rich cell wall structural protein 2precursor 2e+0 At3g23140 zinc finger (C2H2 type) family protein C.G. S.X.
0.05 9e-3 42 Populus trichocarpa PtpAffx.63940.1.S1_s_at CV273881 hypothetical protein - 2e+0 At4g30450 glycine-rich protein C.G. S.X.
0.04 4e-1 36 Triticum aestivum TaAffx.77606.1.S1_at CA745396 - - 3e+0 At4g35100 PIP3 (PLASMA MEMBRANE INTRINSIC PROTEIN 3) C.G. S.X.
0.07 3e-2 38 Vitis vinifera 1607541_at CF208308 hypothetical protein LOC100257913 - 4e-1 At3g13960 AtGRF5 (GROWTH-REGULATING FACTOR 5) C.G. S.X.
0.03 2e-4 46 Zea mays Zm.8846.1.A1_at BM337343 - - 4e+0 At3g29250 copper ion binding / oxidoreductase C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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