Gene omics information

Query gene ID GmaAffx.12926.1.A1_at
Gene name
Organism Glycine max


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.8793.2GmaAffx.12926.1.A1_atBQ298426--1e-38At1g68020ATTPS6S.X.H.G.
0.4665.5Gma.16773.1.A1_atBE556649--2e-1At1g19310zinc finger (C3HC4-type RING finger) family proteinS.X.H.G.
0.4259.3Gma.9505.1.S1_atBI786624--8e-34At4g24800MA3 domain-containing proteinS.X.H.G.
0.3751.7Gma.7381.1.S1_atCD395082--3e-2At3g10480no apical meristem (NAM) family proteinS.X.H.G.
0.3548.6Gma.4370.1.S1_atBQ080781--4e-1At3g03920Gar1 RNA-binding region family proteinS.X.H.G.
0.3447.2Gma.4370.1.S1_x_atBQ080781--4e-1At3g03920Gar1 RNA-binding region family proteinS.X.H.G.
0.3040.4Gma.3825.1.S1_atAW351095--5e-29At5g18110NCBP (NOVEL CAP-BINDING PROTEIN)S.X.H.G.
0.3040.4Gma.7573.1.S1_atBM309802--5e-1At1g23980zinc finger (C3HC4-type RING finger) family proteinS.X.H.G.
0.2839.0Gma.1976.1.A1_atBM519790--9e-1At5g44565unknown proteinS.X.H.G.
0.2633.9Gma.16233.1.S1_atBE659138--7e-7At3g06670bindingS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
78.0100.0GSM147935Laser capture microdissected (LCM) embryo proper at the globular stage, biological replicate 3GSE6414Expression data from soybean seed compartments with embryos at the globular stage
29.799.8GSM147934Laser capture microdissected (LCM) embryo proper at the globular stage, biological replicate 2GSE6414Expression data from soybean seed compartments with embryos at the globular stage
26.899.8GSM201103Laser capture microdissected (LCM) axis root meristem at the early maturation stage, biological replicate 2GSE8112Expression data from soybean seed compartments with embryos at the early maturation stage
20.799.7GSM201109Laser capture microdissected (LCM) cotyledon abaxial epidermis at the early maturation stage, biological replicate 2GSE8112Expression data from soybean seed compartments with embryos at the early maturation stage
20.599.7GSM201118Laser capture microdissected (LCM) seed coat aleurone at the early maturation stage, biological replicate 1GSE8112Expression data from soybean seed compartments with embryos at the early maturation stage
19.499.7GSM201117Laser capture microdissected (LCM) cotyledon vascular bundle at the early maturation stage, biological replicate 2GSE8112Expression data from soybean seed compartments with embryos at the early maturation stage
16.599.6GSM201108Laser capture microdissected (LCM) cotyledon abaxial epidermis at the early maturation stage, biological replicate 1GSE8112Expression data from soybean seed compartments with embryos at the early maturation stage
16.399.6GSM201105Laser capture microdissected (LCM) axis shoot meristem at the early maturation stage, biological replicate 2GSE8112Expression data from soybean seed compartments with embryos at the early maturation stage
16.399.6GSM201096Laser capture microdissected (LCM) axis epidermis at the early maturation stage, biological replicate 1GSE8112Expression data from soybean seed compartments with embryos at the early maturation stage
16.299.6GSM201111Laser capture microdissected (LCM) cotyledon abaxial parenchyma at the early maturation stage, biological replicate 2GSE8112Expression data from soybean seed compartments with embryos at the early maturation stage
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.640650Gma.7533.2.A1_atAW310948--2e-7At1g68020ATTPS6C.G.S.X.
0.640650Gma.7533.2.A1_s_atAW310948--2e-7At1g68020ATTPS6C.G.S.X.
0.155e-63242Gma.7533.1.S1_atBI424658--8e-15At1g68020ATTPS6C.G.S.X.
0.153e-963Gma.8147.2.S1_a_atBU547713--4e-13At1g70290ATTPS8C.G.S.X.
0.153e-963Gma.8147.2.S1_atBU547713--4e-13At1g70290ATTPS8C.G.S.X.
0.046e-446Gma.8873.1.S1_atBU550226--4e-8At1g23870ATTPS9C.G.S.X.
0.142e-344GmaAffx.68001.1.S1_atAW278976--8e-11At1g68020ATTPS6C.G.S.X.
0.014e-240PsAffx.C120000027_atPsAffx.C120000027--1e+0At5g47520AtRABA5a (Arabidopsis Rab GTPase homolog A5a)C.G.S.X.
0.134e-240Gma.5823.1.S1_atBM523758--2e-12At1g06410ATTPS7C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.161e-38161Arabidopsis thalianaAt1g68020843130ATTPS6Encodes an enzyme putatively involved in trehalose biosynthesis. The protein has a trehalose synthase (TPS)-like domain and a trehalose phosphatase (TPP)-like domain. It can complement a yeast mutant lacking both of these activities suggesting that this is a bifunctional enzyme.---C.G.S.X.
0.136e-548Hordeum vulgareContig3375_atContig3375--1e-12At1g68020ATTPS6C.G.S.X.
0.111e-24115Oryza sativaOs09g0397300AK105382.1-Glycosyl transferase, family 20 domain containingprotein7e-28At1g68020ATTPS6C.G.S.X.
0.311e-45184Populus trichocarpaPtpAffx.33775.1.S1_atDN486657hypothetical protein-1e-24At1g68020ATTPS6C.G.S.X.
0.095e-446Triticum aestivumTa.20649.3.S1_x_atCA637788--7e-8At1g68020ATTPS6C.G.S.X.
0.324e-60230Vitis vinifera1608440_atCF207598hypothetical protein LOC100252552-8e-43At1g68020ATTPS6C.G.S.X.
0.093e-652Zea maysZm.3961.1.S1_atCK370362hypothetical protein LOC100272531-3e-7At1g70290ATTPS8C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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