Gene omics information

Query gene ID GmaAffx.12649.1.S1_s_at
Gene name
Organism Glycine max


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.6080.7GmaAffx.12649.1.S1_s_atAW309146--3e-10At4g24780pectate lyase family proteinS.X.H.G.
0.7187.8GmaAffx.13717.1.S1_atBI316021--2e-63At5g63180pectate lyase family proteinS.X.H.G.
0.5576.3Gma.1326.3.S1_atAI442263pectate lyase precursor-1e-47At4g24780pectate lyase family proteinS.X.H.G.
0.5071.7Gma.1326.1.S1_atCD397515pectate lyase precursor-1e-6At1g67750pectate lyase family proteinS.X.H.G.
0.3346.1Gma.6549.1.S1_atBM139635--3e-1At2g19990PR-1-LIKE (PATHOGENESIS-RELATED PROTEIN-1-LIKE)S.X.H.G.
0.2329.9Gma.1326.1.S1_a_atCD397515pectate lyase precursor-1e-6At1g67750pectate lyase family proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
17.299.7GSM29338166_C087.1Q.V7Q3L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
16.799.7GSM2938782_3077.2E.SLE1U, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
15.199.6GSM29304144_C027.1N.V7N2U, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
13.299.5GSM29347965_C099.1R.SLR2U, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
12.499.5GSM24484726_CON.M2W1.CEL, Experimental replicate 1GSE9687Expression patterns in time and space during P.sojae infection of soybean cultivars differing in quantitative resistance
12.399.5GSM29433482_3147.2I.V7I1U, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
12.399.5GSM29469160_3225.2M.V7M2U, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
11.699.4GSM29324936_C055.1P.V7P1L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
11.499.4GSM29304245_1093.1N.R057L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
11.199.4GSM24480717_CON.M2W3.CEL, Experimental replicate 3GSE9687Expression patterns in time and space during P.sojae infection of soybean cultivars differing in quantitative resistance
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.343e-26119Gma.1326.3.S1_atAI442263pectate lyase precursor-1e-47At4g24780pectate lyase family proteinC.G.S.X.
0.011e-138PsAffx.C178000027_atPsAffx.C178000027--3e-1At3g57910D111/G-patch domain-containing proteinC.G.S.X.
0.044e-136GmaAffx.49795.1.S1_atBG154837--1e-9At4g04190unknown proteinC.G.S.X.
0.022e+034PsAffx.C149000022_atPsAffx.C149000022--2e-1At1g51360DABB1 (DIMERIC A/B BARREL DOMAINS-PROTEIN 1)C.G.S.X.
0.032e+034HgAffx.14543.1.S1_atCB825731--3e-1At2g23210UDP-glycosyltransferase/ transferase, transferring glycosyl groupsC.G.S.X.
0.032e+034GmaAffx.78268.1.S1_atBM527436--8e-5At3g01270pectate lyase family proteinC.G.S.X.
0.026e+032PsAffx.CL96Contig2_atPsAffx.CL96Contig2--1e+1At5g09805IDL3 (INFLORESCENCE DEFICIENT IN ABSCISSION (IDA)-LIKE 3)C.G.S.X.
0.026e+032PsAffx.CL2076Contig1_atPsAffx.CL2076Contig1--2e+0At2g11522unknown proteinC.G.S.X.
0.026e+032PsAffx.CL1436Contig1_atPsAffx.CL1436Contig1--9e+0At5g64560magnesium transporter CorA-like family protein (MRS2-2)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.173e-1065Arabidopsis thalianaAt4g24780828580pectate lyase family proteinF:lyase activity, pectate lyase activity;P:biological_process unknown;C:membrane;PBFO---C.G.S.X.
0.122e-342Hordeum vulgareContig11004_atContig11004--3e-22At3g07010pectate lyase family proteinC.G.S.X.
0.046e-756Oryza sativaOs04g0137100AK060609.1-Pectate lyase (Fragment)8e-6At3g07010pectate lyase family proteinC.G.S.X.
0.267e-961Populus trichocarpaPtp.5677.1.S1_atAI165969hypothetical protein-3e-5At1g67750pectate lyase family proteinC.G.S.X.
0.053e-136Triticum aestivumTaAffx.50373.1.S1_atCA741910--7e-2At1g67750pectate lyase family proteinC.G.S.X.
0.213e-1063Vitis vinifera1607945_atAF243475.1pectate lyase-1e-39At1g67750pectate lyase family proteinC.G.S.X.
0.181e-446Zea maysZmAffx.854.1.S1_atAI770665hypothetical protein LOC100273705-5e-8At4g24780pectate lyase family proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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